Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
HOXD8 | hg38_v1_chr2_+_176129680_176129764 | -0.36 | 4.3e-02 | Click! |
DLX4 | hg38_v1_chr17_+_49969178_49969214 | -0.17 | 3.4e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr2_-_157488829 Show fit | 13.41 |
ENST00000435117.1
ENST00000439355.5 |
cytohesin 1 interacting protein |
|
chr14_-_106038355 Show fit | 11.52 |
ENST00000390597.3
|
immunoglobulin heavy variable 2-5 |
|
chr7_+_142791635 Show fit | 10.61 |
ENST00000633705.1
|
T cell receptor beta constant 1 |
|
chr2_+_90172802 Show fit | 10.57 |
ENST00000390277.3
|
immunoglobulin kappa variable 3D-11 |
|
chr1_-_183569186 Show fit | 9.89 |
ENST00000420553.5
ENST00000419402.1 |
neutrophil cytosolic factor 2 |
|
chr12_+_9827472 Show fit | 9.82 |
ENST00000617793.4
ENST00000617889.5 ENST00000354855.7 ENST00000279545.7 |
killer cell lectin like receptor F1 |
|
chr19_-_54313074 Show fit | 9.39 |
ENST00000486742.2
ENST00000432233.8 |
leukocyte immunoglobulin like receptor A5 |
|
chr2_+_90038848 Show fit | 8.57 |
ENST00000390270.2
|
immunoglobulin kappa variable 3D-20 |
|
chr2_-_89100352 Show fit | 8.15 |
ENST00000479981.1
|
immunoglobulin kappa variable 1-16 |
|
chr15_+_58138368 Show fit | 7.80 |
ENST00000219919.9
ENST00000536493.1 |
aquaporin 9 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.2 | 204.6 | GO:0006958 | complement activation, classical pathway(GO:0006958) |
0.3 | 60.9 | GO:0002377 | immunoglobulin production(GO:0002377) |
1.3 | 22.7 | GO:0034197 | acylglycerol transport(GO:0034196) triglyceride transport(GO:0034197) |
0.0 | 21.9 | GO:0043312 | neutrophil activation involved in immune response(GO:0002283) neutrophil degranulation(GO:0043312) |
0.5 | 17.6 | GO:0045730 | respiratory burst(GO:0045730) |
0.0 | 16.3 | GO:0050911 | detection of chemical stimulus involved in sensory perception of smell(GO:0050911) |
0.2 | 15.2 | GO:0042267 | natural killer cell mediated cytotoxicity(GO:0042267) |
0.4 | 13.1 | GO:0050869 | negative regulation of B cell activation(GO:0050869) |
0.1 | 12.7 | GO:0034260 | negative regulation of GTPase activity(GO:0034260) |
2.5 | 12.3 | GO:2000473 | regulation of hematopoietic stem cell migration(GO:2000471) positive regulation of hematopoietic stem cell migration(GO:2000473) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 80.9 | GO:0072562 | blood microparticle(GO:0072562) |
1.1 | 58.4 | GO:0042571 | immunoglobulin complex, circulating(GO:0042571) |
0.1 | 40.7 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.5 | 24.8 | GO:0034364 | high-density lipoprotein particle(GO:0034364) |
0.1 | 18.8 | GO:0035578 | azurophil granule lumen(GO:0035578) |
0.1 | 14.7 | GO:0101003 | ficolin-1-rich granule membrane(GO:0101003) |
1.3 | 14.3 | GO:0032010 | phagolysosome(GO:0032010) |
0.2 | 14.2 | GO:0001772 | immunological synapse(GO:0001772) |
0.3 | 13.7 | GO:0031092 | platelet alpha granule membrane(GO:0031092) |
0.0 | 13.7 | GO:0030667 | secretory granule membrane(GO:0030667) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 248.3 | GO:0003823 | antigen binding(GO:0003823) |
0.1 | 20.9 | GO:0030246 | carbohydrate binding(GO:0030246) |
1.2 | 17.8 | GO:0032393 | MHC class I receptor activity(GO:0032393) |
0.5 | 14.9 | GO:0038187 | signaling pattern recognition receptor activity(GO:0008329) pattern recognition receptor activity(GO:0038187) |
1.0 | 14.3 | GO:0016176 | superoxide-generating NADPH oxidase activator activity(GO:0016176) |
2.3 | 13.8 | GO:0060230 | lipoprotein lipase activator activity(GO:0060230) |
0.3 | 13.8 | GO:0015020 | glucuronosyltransferase activity(GO:0015020) |
0.4 | 13.6 | GO:0005095 | GTPase inhibitor activity(GO:0005095) |
0.2 | 12.7 | GO:0001784 | phosphotyrosine binding(GO:0001784) |
3.1 | 12.3 | GO:0017159 | pantetheine hydrolase activity(GO:0017159) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 24.1 | PID IL12 2PATHWAY | IL12-mediated signaling events |
0.1 | 21.5 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.1 | 18.2 | PID CMYB PATHWAY | C-MYB transcription factor network |
0.2 | 15.6 | SIG PIP3 SIGNALING IN B LYMPHOCYTES | Genes related to PIP3 signaling in B lymphocytes |
0.1 | 14.5 | PID RAC1 PATHWAY | RAC1 signaling pathway |
0.2 | 14.4 | PID UPA UPAR PATHWAY | Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling |
0.3 | 11.9 | SA MMP CYTOKINE CONNECTION | Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix. |
0.2 | 9.0 | PID TOLL ENDOGENOUS PATHWAY | Endogenous TLR signaling |
0.1 | 8.7 | PID IL8 CXCR2 PATHWAY | IL8- and CXCR2-mediated signaling events |
0.0 | 7.1 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 34.3 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
0.1 | 21.9 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.4 | 17.7 | REACTOME COMPLEMENT CASCADE | Genes involved in Complement cascade |
0.2 | 17.4 | REACTOME IMMUNOREGULATORY INTERACTIONS BETWEEN A LYMPHOID AND A NON LYMPHOID CELL | Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell |
0.1 | 15.2 | REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 | Genes involved in Response to elevated platelet cytosolic Ca2+ |
0.8 | 13.7 | REACTOME RECYCLING OF BILE ACIDS AND SALTS | Genes involved in Recycling of bile acids and salts |
0.5 | 13.7 | REACTOME PHOSPHORYLATION OF CD3 AND TCR ZETA CHAINS | Genes involved in Phosphorylation of CD3 and TCR zeta chains |
0.4 | 12.2 | REACTOME GLUCURONIDATION | Genes involved in Glucuronidation |
0.2 | 11.2 | REACTOME LATENT INFECTION OF HOMO SAPIENS WITH MYCOBACTERIUM TUBERCULOSIS | Genes involved in Latent infection of Homo sapiens with Mycobacterium tuberculosis |
0.4 | 10.7 | REACTOME HYALURONAN UPTAKE AND DEGRADATION | Genes involved in Hyaluronan uptake and degradation |