Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
E2F2 | hg38_v1_chr1_-_23531206_23531241 | 0.55 | 1.2e-03 | Click! |
E2F5 | hg38_v1_chr8_+_85209213_85209270 | 0.42 | 1.7e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_+_4909430 Show fit | 4.08 |
ENST00000620565.4
ENST00000613817.4 ENST00000624301.3 ENST00000650932.1 |
ubiquitin like with PHD and ring finger domains 1 |
|
chr2_+_173354820 Show fit | 3.83 |
ENST00000347703.7
ENST00000410101.7 ENST00000410019.3 ENST00000306721.8 |
cell division cycle associated 7 |
|
chr1_-_25905989 Show fit | 3.16 |
ENST00000399728.5
|
stathmin 1 |
|
chr1_-_25906411 Show fit | 3.06 |
ENST00000455785.7
|
stathmin 1 |
|
chr20_-_33686371 Show fit | 3.02 |
ENST00000343380.6
|
E2F transcription factor 1 |
|
chr1_-_23531206 Show fit | 2.78 |
ENST00000361729.3
|
E2F transcription factor 2 |
|
chr1_-_25906931 Show fit | 2.63 |
ENST00000357865.6
|
stathmin 1 |
|
chr10_+_110567666 Show fit | 2.56 |
ENST00000361804.5
|
structural maintenance of chromosomes 3 |
|
chr15_+_32615501 Show fit | 2.49 |
ENST00000361627.8
ENST00000567348.5 ENST00000563864.5 ENST00000543522.5 |
Rho GTPase activating protein 11A |
|
chr20_-_37095985 Show fit | 2.47 |
ENST00000344359.7
ENST00000373664.8 |
RB transcriptional corepressor like 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 11.2 | GO:0070494 | regulation of thrombin receptor signaling pathway(GO:0070494) negative regulation of thrombin receptor signaling pathway(GO:0070495) |
0.6 | 9.1 | GO:0006268 | DNA unwinding involved in DNA replication(GO:0006268) |
0.2 | 6.2 | GO:1901897 | regulation of relaxation of cardiac muscle(GO:1901897) |
1.4 | 5.8 | GO:1990086 | lens fiber cell apoptotic process(GO:1990086) |
1.1 | 5.3 | GO:1904565 | response to 1-oleoyl-sn-glycerol 3-phosphate(GO:1904565) cellular response to 1-oleoyl-sn-glycerol 3-phosphate(GO:1904566) |
0.0 | 4.6 | GO:0000079 | regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0000079) |
0.4 | 4.2 | GO:0033314 | mitotic DNA replication checkpoint(GO:0033314) |
0.3 | 3.8 | GO:2000373 | regulation of DNA topoisomerase (ATP-hydrolyzing) activity(GO:2000371) positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity(GO:2000373) |
0.2 | 3.6 | GO:0070050 | neuron cellular homeostasis(GO:0070050) |
0.2 | 2.9 | GO:1902969 | mitotic DNA replication(GO:1902969) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 9.7 | GO:0005874 | microtubule(GO:0005874) |
0.4 | 6.6 | GO:0042555 | MCM complex(GO:0042555) |
0.1 | 5.7 | GO:0033017 | sarcoplasmic reticulum membrane(GO:0033017) |
0.1 | 5.5 | GO:0035098 | ESC/E(Z) complex(GO:0035098) |
0.1 | 5.3 | GO:0043198 | dendritic shaft(GO:0043198) |
0.1 | 4.2 | GO:0005657 | replication fork(GO:0005657) |
0.0 | 3.4 | GO:0099501 | synaptic vesicle membrane(GO:0030672) exocytic vesicle membrane(GO:0099501) |
1.1 | 3.3 | GO:0035189 | Rb-E2F complex(GO:0035189) |
0.1 | 3.0 | GO:0000800 | lateral element(GO:0000800) |
0.4 | 2.6 | GO:0034991 | nuclear meiotic cohesin complex(GO:0034991) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 11.5 | GO:0015631 | tubulin binding(GO:0015631) |
0.3 | 5.6 | GO:0004723 | calcium-dependent protein serine/threonine phosphatase activity(GO:0004723) |
0.3 | 5.4 | GO:0003688 | DNA replication origin binding(GO:0003688) |
0.6 | 5.3 | GO:0035727 | lysophosphatidic acid binding(GO:0035727) |
0.2 | 5.0 | GO:0000150 | recombinase activity(GO:0000150) |
0.1 | 3.9 | GO:0004003 | ATP-dependent DNA helicase activity(GO:0004003) |
0.0 | 3.9 | GO:0035064 | methylated histone binding(GO:0035064) |
0.6 | 3.8 | GO:0031493 | nucleosomal histone binding(GO:0031493) |
0.4 | 3.2 | GO:0010997 | anaphase-promoting complex binding(GO:0010997) |
0.5 | 3.0 | GO:0036033 | mediator complex binding(GO:0036033) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 15.8 | PID ATR PATHWAY | ATR signaling pathway |
0.4 | 11.2 | PID P38 GAMMA DELTA PATHWAY | Signaling mediated by p38-gamma and p38-delta |
0.1 | 7.2 | PID E2F PATHWAY | E2F transcription factor network |
0.1 | 5.7 | ST WNT CA2 CYCLIC GMP PATHWAY | Wnt/Ca2+/cyclic GMP signaling. |
0.0 | 5.7 | PID LYSOPHOSPHOLIPID PATHWAY | LPA receptor mediated events |
0.3 | 5.6 | SA REG CASCADE OF CYCLIN EXPR | Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases. |
0.0 | 5.2 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.0 | 3.7 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.1 | 2.7 | PID ATM PATHWAY | ATM pathway |
0.0 | 2.5 | PID DELTA NP63 PATHWAY | Validated transcriptional targets of deltaNp63 isoforms |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 8.9 | REACTOME UNWINDING OF DNA | Genes involved in Unwinding of DNA |
0.2 | 7.5 | REACTOME MEIOTIC RECOMBINATION | Genes involved in Meiotic Recombination |
0.5 | 6.3 | REACTOME CDC6 ASSOCIATION WITH THE ORC ORIGIN COMPLEX | Genes involved in CDC6 association with the ORC:origin complex |
0.0 | 5.5 | REACTOME G ALPHA I SIGNALLING EVENTS | Genes involved in G alpha (i) signalling events |
0.2 | 4.9 | REACTOME ACTIVATION OF THE PRE REPLICATIVE COMPLEX | Genes involved in Activation of the pre-replicative complex |
0.2 | 4.2 | REACTOME G1 S SPECIFIC TRANSCRIPTION | Genes involved in G1/S-Specific Transcription |
0.1 | 3.0 | REACTOME G0 AND EARLY G1 | Genes involved in G0 and Early G1 |
0.1 | 2.6 | REACTOME ZINC TRANSPORTERS | Genes involved in Zinc transporters |
0.0 | 2.5 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.5 | 2.4 | REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION | Genes involved in E2F-enabled inhibition of pre-replication complex formation |