Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
E2F7 | hg38_v1_chr12_-_77065526_77065586 | 0.67 | 2.4e-05 | Click! |
E2F1 | hg38_v1_chr20_-_33686371_33686407 | 0.46 | 7.7e-03 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
4.1 | 12.3 | GO:0036333 | hepatocyte homeostasis(GO:0036333) response to tetrachloromethane(GO:1904772) |
2.3 | 11.6 | GO:2000325 | regulation of ligand-dependent nuclear receptor transcription coactivator activity(GO:2000325) positive regulation of ligand-dependent nuclear receptor transcription coactivator activity(GO:2000327) |
0.1 | 11.6 | GO:1902850 | microtubule cytoskeleton organization involved in mitosis(GO:1902850) |
0.0 | 8.5 | GO:0048232 | spermatogenesis(GO:0007283) male gamete generation(GO:0048232) |
0.1 | 8.1 | GO:0000731 | DNA synthesis involved in DNA repair(GO:0000731) |
0.9 | 8.0 | GO:0000727 | double-strand break repair via break-induced replication(GO:0000727) |
0.3 | 7.8 | GO:0045141 | meiotic telomere clustering(GO:0045141) chromosome localization to nuclear envelope involved in homologous chromosome segregation(GO:0090220) |
0.2 | 7.7 | GO:0000083 | regulation of transcription involved in G1/S transition of mitotic cell cycle(GO:0000083) |
0.7 | 6.9 | GO:0010724 | regulation of definitive erythrocyte differentiation(GO:0010724) |
0.1 | 6.8 | GO:0071349 | interleukin-12-mediated signaling pathway(GO:0035722) cellular response to interleukin-12(GO:0071349) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 29.2 | GO:0016604 | nuclear body(GO:0016604) |
0.9 | 16.8 | GO:0030015 | CCR4-NOT core complex(GO:0030015) |
0.1 | 12.9 | GO:0000793 | condensed chromosome(GO:0000793) |
0.7 | 12.4 | GO:0042555 | MCM complex(GO:0042555) |
0.5 | 12.4 | GO:0045120 | pronucleus(GO:0045120) |
0.2 | 12.2 | GO:0000795 | synaptonemal complex(GO:0000795) |
0.0 | 10.2 | GO:0000785 | chromatin(GO:0000785) |
0.3 | 9.0 | GO:0043186 | P granule(GO:0043186) pole plasm(GO:0045495) germ plasm(GO:0060293) |
0.2 | 8.5 | GO:0035861 | site of double-strand break(GO:0035861) |
0.4 | 7.8 | GO:0090543 | Flemming body(GO:0090543) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 21.6 | GO:0003677 | DNA binding(GO:0003677) |
1.0 | 14.1 | GO:0046976 | histone methyltransferase activity (H3-K27 specific)(GO:0046976) |
0.1 | 11.6 | GO:0005154 | epidermal growth factor receptor binding(GO:0005154) |
0.0 | 10.4 | GO:0003682 | chromatin binding(GO:0003682) |
0.1 | 9.9 | GO:0004386 | helicase activity(GO:0004386) |
0.1 | 9.0 | GO:0035064 | methylated histone binding(GO:0035064) |
0.2 | 8.7 | GO:0004003 | ATP-dependent DNA helicase activity(GO:0004003) |
0.1 | 7.9 | GO:0016279 | protein-lysine N-methyltransferase activity(GO:0016279) |
0.2 | 7.6 | GO:0003887 | DNA-directed DNA polymerase activity(GO:0003887) |
0.1 | 7.6 | GO:0035326 | enhancer binding(GO:0035326) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 21.4 | PID E2F PATHWAY | E2F transcription factor network |
0.3 | 19.8 | PID FANCONI PATHWAY | Fanconi anemia pathway |
0.1 | 15.0 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.1 | 10.2 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
0.2 | 10.1 | PID ATR PATHWAY | ATR signaling pathway |
0.1 | 7.6 | PID CASPASE PATHWAY | Caspase cascade in apoptosis |
0.1 | 5.3 | PID PLK1 PATHWAY | PLK1 signaling events |
0.1 | 4.2 | PID HIF2PATHWAY | HIF-2-alpha transcription factor network |
0.0 | 4.2 | PID TAP63 PATHWAY | Validated transcriptional targets of TAp63 isoforms |
0.0 | 3.9 | PID SMAD2 3NUCLEAR PATHWAY | Regulation of nuclear SMAD2/3 signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 14.2 | REACTOME MEIOSIS | Genes involved in Meiosis |
0.8 | 12.9 | REACTOME UNWINDING OF DNA | Genes involved in Unwinding of DNA |
0.4 | 11.5 | REACTOME G1 S SPECIFIC TRANSCRIPTION | Genes involved in G1/S-Specific Transcription |
0.1 | 11.2 | REACTOME MRNA SPLICING | Genes involved in mRNA Splicing |
0.1 | 9.1 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |
0.3 | 8.8 | REACTOME G0 AND EARLY G1 | Genes involved in G0 and Early G1 |
0.4 | 8.4 | REACTOME POL SWITCHING | Genes involved in Polymerase switching |
0.1 | 7.5 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.2 | 7.4 | REACTOME MEIOTIC RECOMBINATION | Genes involved in Meiotic Recombination |
0.1 | 5.8 | REACTOME TRANSPORT OF RIBONUCLEOPROTEINS INTO THE HOST NUCLEUS | Genes involved in Transport of Ribonucleoproteins into the Host Nucleus |