Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
EGR3 | hg38_v1_chr8_-_22693469_22693487 | 0.51 | 2.7e-03 | Click! |
EGR2 | hg38_v1_chr10_-_62816341_62816388 | 0.06 | 7.2e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr11_+_124739927 Show fit | 6.87 |
ENST00000284292.11
ENST00000412681.2 |
neurogranin |
|
chr22_+_19714450 Show fit | 4.36 |
ENST00000455784.7
ENST00000406395.5 |
septin 5 |
|
chrX_-_47619850 Show fit | 4.21 |
ENST00000295987.13
ENST00000340666.5 |
synapsin I |
|
chr4_-_36244438 Show fit | 4.10 |
ENST00000303965.9
|
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 |
|
chr19_+_35143237 Show fit | 3.75 |
ENST00000586063.5
ENST00000270310.7 ENST00000588265.1 |
FXYD domain containing ion transport regulator 7 |
|
chr16_-_31010611 Show fit | 3.68 |
ENST00000215095.11
|
syntaxin 1B |
|
chr10_-_43267059 Show fit | 3.40 |
ENST00000395810.6
|
RasGEF domain family member 1A |
|
chr4_-_89837106 Show fit | 3.29 |
ENST00000394986.5
ENST00000394991.8 ENST00000506244.5 ENST00000394989.6 ENST00000673902.1 ENST00000674129.1 |
synuclein alpha |
|
chr22_+_19714675 Show fit | 3.28 |
ENST00000412544.5
|
septin 5 |
|
chrX_+_118823762 Show fit | 3.08 |
ENST00000310164.3
|
zinc finger CCHC-type containing 12 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 11.9 | GO:0007214 | gamma-aminobutyric acid signaling pathway(GO:0007214) |
1.4 | 8.1 | GO:0051622 | negative regulation of dopamine uptake involved in synaptic transmission(GO:0051585) norepinephrine uptake(GO:0051620) regulation of norepinephrine uptake(GO:0051621) negative regulation of norepinephrine uptake(GO:0051622) negative regulation of catecholamine uptake involved in synaptic transmission(GO:0051945) regulation of glutathione peroxidase activity(GO:1903282) positive regulation of glutathione peroxidase activity(GO:1903284) positive regulation of hydrogen peroxide catabolic process(GO:1903285) positive regulation of peroxidase activity(GO:2000470) |
0.2 | 7.1 | GO:1900273 | positive regulation of long-term synaptic potentiation(GO:1900273) |
0.5 | 5.6 | GO:0051388 | positive regulation of neurotrophin TRK receptor signaling pathway(GO:0051388) |
0.9 | 5.1 | GO:0019509 | L-methionine biosynthetic process from methylthioadenosine(GO:0019509) |
0.2 | 4.9 | GO:2000480 | negative regulation of cAMP-dependent protein kinase activity(GO:2000480) |
0.2 | 4.5 | GO:0048172 | regulation of short-term neuronal synaptic plasticity(GO:0048172) |
0.2 | 4.2 | GO:2000311 | regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity(GO:2000311) |
0.2 | 4.2 | GO:0097091 | synaptic vesicle clustering(GO:0097091) |
0.2 | 4.1 | GO:0045162 | clustering of voltage-gated sodium channels(GO:0045162) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 11.2 | GO:0060076 | excitatory synapse(GO:0060076) |
0.2 | 9.2 | GO:0031092 | platelet alpha granule membrane(GO:0031092) |
0.1 | 8.1 | GO:0042734 | presynaptic membrane(GO:0042734) |
0.3 | 8.0 | GO:0098563 | integral component of synaptic vesicle membrane(GO:0030285) intrinsic component of synaptic vesicle membrane(GO:0098563) |
0.5 | 7.9 | GO:0044327 | dendritic spine head(GO:0044327) |
0.0 | 7.6 | GO:0098793 | presynapse(GO:0098793) |
0.1 | 7.3 | GO:0048786 | presynaptic active zone(GO:0048786) |
0.0 | 6.3 | GO:0043025 | neuronal cell body(GO:0043025) |
0.1 | 5.4 | GO:0043198 | dendritic shaft(GO:0043198) |
0.1 | 5.3 | GO:0043194 | axon initial segment(GO:0043194) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.4 | 8.1 | GO:0060961 | phospholipase D inhibitor activity(GO:0060961) |
0.2 | 8.0 | GO:0008331 | high voltage-gated calcium channel activity(GO:0008331) |
0.2 | 7.5 | GO:0070300 | phosphatidic acid binding(GO:0070300) |
0.1 | 7.2 | GO:0048365 | Rac GTPase binding(GO:0048365) |
0.1 | 7.0 | GO:0005484 | SNAP receptor activity(GO:0005484) |
0.2 | 5.5 | GO:0008603 | cAMP-dependent protein kinase regulator activity(GO:0008603) |
0.6 | 5.0 | GO:1904315 | neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential(GO:0099529) transmitter-gated ion channel activity involved in regulation of postsynaptic membrane potential(GO:1904315) |
0.0 | 4.9 | GO:0003924 | GTPase activity(GO:0003924) |
0.2 | 4.7 | GO:0061578 | Lys63-specific deubiquitinase activity(GO:0061578) |
0.1 | 4.3 | GO:0005154 | epidermal growth factor receptor binding(GO:0005154) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 13.3 | PID ALPHA SYNUCLEIN PATHWAY | Alpha-synuclein signaling |
0.1 | 11.0 | PID RAC1 PATHWAY | RAC1 signaling pathway |
0.1 | 5.5 | PID INTEGRIN A4B1 PATHWAY | Alpha4 beta1 integrin signaling events |
0.1 | 4.8 | PID ARF6 PATHWAY | Arf6 signaling events |
0.0 | 4.0 | PID RHOA REG PATHWAY | Regulation of RhoA activity |
0.1 | 3.9 | PID EPHA FWDPATHWAY | EPHA forward signaling |
0.0 | 3.9 | PID ERBB1 INTERNALIZATION PATHWAY | Internalization of ErbB1 |
0.0 | 3.7 | PID CD8 TCR PATHWAY | TCR signaling in naïve CD8+ T cells |
0.0 | 2.3 | PID MAPK TRK PATHWAY | Trk receptor signaling mediated by the MAPK pathway |
0.0 | 2.3 | PID BCR 5PATHWAY | BCR signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 9.5 | REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Dopamine Neurotransmitter Release Cycle |
0.2 | 7.9 | REACTOME AMYLOIDS | Genes involved in Amyloids |
0.1 | 7.8 | REACTOME DARPP 32 EVENTS | Genes involved in DARPP-32 events |
0.1 | 6.6 | REACTOME EGFR DOWNREGULATION | Genes involved in EGFR downregulation |
0.1 | 5.8 | REACTOME GABA A RECEPTOR ACTIVATION | Genes involved in GABA A receptor activation |
0.0 | 5.5 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.1 | 5.3 | REACTOME NEGATIVE REGULATORS OF RIG I MDA5 SIGNALING | Genes involved in Negative regulators of RIG-I/MDA5 signaling |
0.2 | 4.9 | REACTOME PROTEOLYTIC CLEAVAGE OF SNARE COMPLEX PROTEINS | Genes involved in Proteolytic cleavage of SNARE complex proteins |
0.0 | 4.7 | REACTOME REGULATION OF INSULIN SECRETION | Genes involved in Regulation of Insulin Secretion |
0.0 | 4.7 | REACTOME NRAGE SIGNALS DEATH THROUGH JNK | Genes involved in NRAGE signals death through JNK |