Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
EMX1 | hg38_v1_chr2_+_72916183_72916260 | 0.34 | 5.6e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr11_-_111923722 Show fit | 7.90 |
ENST00000527950.5
|
crystallin alpha B |
|
chr12_-_6124662 Show fit | 5.77 |
ENST00000261405.10
|
von Willebrand factor |
|
chr1_+_160190567 Show fit | 4.92 |
ENST00000368078.8
|
calsequestrin 1 |
|
chr11_-_13496018 Show fit | 4.65 |
ENST00000529816.1
|
parathyroid hormone |
|
chr9_+_131289685 Show fit | 4.26 |
ENST00000372264.4
|
phospholipid phosphatase 7 (inactive) |
|
chr6_-_169250825 Show fit | 4.16 |
ENST00000676869.1
ENST00000676760.1 |
thrombospondin 2 |
|
chr15_+_62561361 Show fit | 3.79 |
ENST00000561311.5
|
talin 2 |
|
chr4_-_137532452 Show fit | 3.64 |
ENST00000412923.6
ENST00000511115.5 ENST00000344876.9 ENST00000507846.5 ENST00000510305.5 ENST00000611581.1 |
protocadherin 18 |
|
chr1_+_159204860 Show fit | 3.59 |
ENST00000368122.4
ENST00000368121.6 |
atypical chemokine receptor 1 (Duffy blood group) |
|
chr13_-_37598750 Show fit | 3.47 |
ENST00000379743.8
ENST00000379742.4 ENST00000379749.8 ENST00000379747.9 ENST00000541179.5 ENST00000541481.5 |
periostin |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 8.2 | GO:0007156 | homophilic cell adhesion via plasma membrane adhesion molecules(GO:0007156) |
1.6 | 7.9 | GO:0090290 | positive regulation of osteoclast proliferation(GO:0090290) |
0.3 | 7.9 | GO:0007021 | tubulin complex assembly(GO:0007021) |
0.1 | 7.2 | GO:0016266 | O-glycan processing(GO:0016266) |
0.2 | 6.4 | GO:0003334 | keratinocyte development(GO:0003334) |
0.0 | 6.4 | GO:0006936 | muscle contraction(GO:0006936) |
0.1 | 5.9 | GO:2000649 | regulation of sodium ion transmembrane transporter activity(GO:2000649) |
0.0 | 5.2 | GO:0008360 | regulation of cell shape(GO:0008360) |
0.3 | 4.9 | GO:0014809 | regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion(GO:0014809) |
0.2 | 4.9 | GO:0042340 | keratan sulfate catabolic process(GO:0042340) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 15.2 | GO:0005796 | Golgi lumen(GO:0005796) |
0.5 | 7.9 | GO:0097512 | cardiac myofibril(GO:0097512) |
0.1 | 7.3 | GO:0016010 | dystrophin-associated glycoprotein complex(GO:0016010) glycoprotein complex(GO:0090665) |
0.0 | 6.6 | GO:0055037 | recycling endosome(GO:0055037) |
0.0 | 6.3 | GO:0030018 | Z disc(GO:0030018) |
0.0 | 6.3 | GO:0031225 | anchored component of membrane(GO:0031225) |
0.0 | 6.3 | GO:0043197 | dendritic spine(GO:0043197) neuron spine(GO:0044309) |
0.0 | 6.3 | GO:0016607 | nuclear speck(GO:0016607) |
0.1 | 5.7 | GO:0002102 | podosome(GO:0002102) |
0.0 | 5.1 | GO:0031091 | platelet alpha granule(GO:0031091) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 9.7 | GO:0051371 | muscle alpha-actinin binding(GO:0051371) |
0.1 | 9.1 | GO:0017080 | sodium channel regulator activity(GO:0017080) |
0.3 | 8.6 | GO:0005212 | structural constituent of eye lens(GO:0005212) |
0.0 | 8.6 | GO:0003779 | actin binding(GO:0003779) |
0.2 | 7.9 | GO:0048018 | receptor agonist activity(GO:0048018) |
0.3 | 6.4 | GO:0008179 | adenylate cyclase binding(GO:0008179) |
0.0 | 5.4 | GO:0005200 | structural constituent of cytoskeleton(GO:0005200) |
0.1 | 5.0 | GO:0019865 | immunoglobulin binding(GO:0019865) |
0.1 | 4.2 | GO:0008093 | cytoskeletal adaptor activity(GO:0008093) |
0.0 | 4.1 | GO:0005201 | extracellular matrix structural constituent(GO:0005201) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 9.6 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 8.7 | NABA CORE MATRISOME | Ensemble of genes encoding core extracellular matrix including ECM glycoproteins, collagens and proteoglycans |
0.0 | 7.1 | PID TRKR PATHWAY | Neurotrophic factor-mediated Trk receptor signaling |
0.0 | 5.1 | PID INTEGRIN A4B1 PATHWAY | Alpha4 beta1 integrin signaling events |
0.0 | 4.2 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 4.1 | NABA COLLAGENS | Genes encoding collagen proteins |
0.0 | 3.6 | PID BMP PATHWAY | BMP receptor signaling |
0.1 | 3.2 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
0.0 | 3.1 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.0 | 2.6 | PID KIT PATHWAY | Signaling events mediated by Stem cell factor receptor (c-Kit) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 8.1 | REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS | Genes involved in Termination of O-glycan biosynthesis |
0.0 | 7.0 | REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS | Genes involved in Class B/2 (Secretin family receptors) |
0.3 | 5.8 | REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN | Genes involved in Platelet Adhesion to exposed collagen |
0.0 | 5.5 | REACTOME AMINO ACID AND OLIGOPEPTIDE SLC TRANSPORTERS | Genes involved in Amino acid and oligopeptide SLC transporters |
0.0 | 5.1 | REACTOME SIGNALING BY PDGF | Genes involved in Signaling by PDGF |
0.3 | 4.9 | REACTOME KERATAN SULFATE DEGRADATION | Genes involved in Keratan sulfate degradation |
0.1 | 4.9 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.2 | 4.4 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.1 | 4.4 | REACTOME NETRIN1 SIGNALING | Genes involved in Netrin-1 signaling |
0.0 | 3.6 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |