Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
EMX2 | hg38_v1_chr10_+_117542416_117542445 | 0.15 | 4.2e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_+_53962925 Show fit | 4.17 |
ENST00000270458.4
|
calcium voltage-gated channel auxiliary subunit gamma 8 |
|
chr2_+_17541157 Show fit | 2.37 |
ENST00000406397.1
|
visinin like 1 |
|
chr10_-_20897288 Show fit | 2.14 |
ENST00000377122.9
|
nebulette |
|
chr6_+_13272709 Show fit | 2.12 |
ENST00000379335.8
|
phosphatase and actin regulator 1 |
|
chr17_-_40937641 Show fit | 2.09 |
ENST00000209718.8
|
keratin 23 |
|
chr1_+_149782671 Show fit | 2.01 |
ENST00000444948.5
ENST00000369168.5 |
Fc fragment of IgG receptor Ia |
|
chr4_-_88284553 Show fit | 1.91 |
ENST00000608933.6
ENST00000295908.11 |
protein phosphatase, Mg2+/Mn2+ dependent 1K |
|
chr4_-_88284616 Show fit | 1.89 |
ENST00000508256.5
|
protein phosphatase, Mg2+/Mn2+ dependent 1K |
|
chr5_-_74866958 Show fit | 1.88 |
ENST00000389156.9
|
family with sequence similarity 169 member A |
|
chr18_-_26865689 Show fit | 1.87 |
ENST00000675739.1
ENST00000383168.9 ENST00000672981.2 ENST00000578776.1 |
aquaporin 4 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 6.9 | GO:0009083 | branched-chain amino acid catabolic process(GO:0009083) |
0.1 | 4.2 | GO:2000311 | regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity(GO:2000311) |
0.0 | 3.6 | GO:0060333 | interferon-gamma-mediated signaling pathway(GO:0060333) |
0.0 | 3.5 | GO:0070268 | cornification(GO:0070268) |
0.3 | 3.1 | GO:0097338 | response to clozapine(GO:0097338) |
0.1 | 3.0 | GO:0006833 | water transport(GO:0006833) |
0.1 | 2.4 | GO:0033234 | negative regulation of protein sumoylation(GO:0033234) |
0.1 | 2.3 | GO:0009756 | carbohydrate mediated signaling(GO:0009756) |
0.3 | 2.2 | GO:0071725 | toll-like receptor TLR1:TLR2 signaling pathway(GO:0038123) response to triacyl bacterial lipopeptide(GO:0071725) cellular response to triacyl bacterial lipopeptide(GO:0071727) |
0.0 | 2.2 | GO:0035774 | positive regulation of insulin secretion involved in cellular response to glucose stimulus(GO:0035774) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.2 | GO:0032281 | AMPA glutamate receptor complex(GO:0032281) |
0.0 | 3.6 | GO:0043204 | perikaryon(GO:0043204) |
0.1 | 3.5 | GO:0005952 | cAMP-dependent protein kinase complex(GO:0005952) |
0.0 | 2.9 | GO:0036126 | sperm flagellum(GO:0036126) |
0.0 | 2.8 | GO:0005637 | nuclear inner membrane(GO:0005637) |
0.0 | 2.6 | GO:0098878 | ionotropic glutamate receptor complex(GO:0008328) neurotransmitter receptor complex(GO:0098878) |
0.0 | 2.6 | GO:0005882 | intermediate filament(GO:0005882) |
0.5 | 2.5 | GO:0045272 | plasma membrane respiratory chain complex I(GO:0045272) |
0.0 | 2.4 | GO:0030669 | clathrin-coated endocytic vesicle membrane(GO:0030669) |
0.2 | 2.2 | GO:0044294 | dendritic growth cone(GO:0044294) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 8.2 | GO:0004722 | protein serine/threonine phosphatase activity(GO:0004722) |
0.1 | 4.5 | GO:0005245 | voltage-gated calcium channel activity(GO:0005245) |
0.2 | 3.4 | GO:0015250 | water channel activity(GO:0015250) |
0.1 | 3.1 | GO:0004691 | cAMP-dependent protein kinase activity(GO:0004691) |
0.0 | 2.9 | GO:0004693 | cyclin-dependent protein serine/threonine kinase activity(GO:0004693) |
0.1 | 2.8 | GO:0005164 | tumor necrosis factor receptor binding(GO:0005164) |
0.1 | 2.5 | GO:0051537 | 2 iron, 2 sulfur cluster binding(GO:0051537) |
0.0 | 2.3 | GO:0042287 | MHC protein binding(GO:0042287) |
0.3 | 2.2 | GO:0016019 | peptidoglycan receptor activity(GO:0016019) |
0.0 | 2.2 | GO:0008157 | protein phosphatase 1 binding(GO:0008157) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.3 | PID INTEGRIN A4B1 PATHWAY | Alpha4 beta1 integrin signaling events |
0.0 | 1.8 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.0 | 1.2 | PID GLYPICAN 1PATHWAY | Glypican 1 network |
0.0 | 1.2 | PID CASPASE PATHWAY | Caspase cascade in apoptosis |
0.0 | 0.9 | PID BMP PATHWAY | BMP receptor signaling |
0.0 | 0.9 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.0 | 0.7 | PID ANTHRAX PATHWAY | Cellular roles of Anthrax toxin |
0.0 | 0.7 | PID P38 MKK3 6PATHWAY | p38 MAPK signaling pathway |
0.0 | 0.7 | PID IL12 STAT4 PATHWAY | IL12 signaling mediated by STAT4 |
0.0 | 0.6 | PID INTEGRIN A9B1 PATHWAY | Alpha9 beta1 integrin signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.2 | REACTOME TRAFFICKING OF AMPA RECEPTORS | Genes involved in Trafficking of AMPA receptors |
0.1 | 3.5 | REACTOME PKA MEDIATED PHOSPHORYLATION OF CREB | Genes involved in PKA-mediated phosphorylation of CREB |
0.2 | 3.4 | REACTOME PASSIVE TRANSPORT BY AQUAPORINS | Genes involved in Passive Transport by Aquaporins |
0.0 | 3.0 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
0.0 | 3.0 | REACTOME INTERFERON GAMMA SIGNALING | Genes involved in Interferon gamma signaling |
0.1 | 2.4 | REACTOME N GLYCAN ANTENNAE ELONGATION | Genes involved in N-Glycan antennae elongation |
0.1 | 2.2 | REACTOME IKK COMPLEX RECRUITMENT MEDIATED BY RIP1 | Genes involved in IKK complex recruitment mediated by RIP1 |
0.0 | 2.1 | REACTOME GABA A RECEPTOR ACTIVATION | Genes involved in GABA A receptor activation |
0.1 | 1.5 | REACTOME NOREPINEPHRINE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Norepinephrine Neurotransmitter Release Cycle |
0.0 | 1.5 | REACTOME THE ROLE OF NEF IN HIV1 REPLICATION AND DISEASE PATHOGENESIS | Genes involved in The role of Nef in HIV-1 replication and disease pathogenesis |