Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
ERG | hg38_v1_chr21_-_38660656_38660681 | 0.22 | 2.2e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr22_+_22822658 Show fit | 15.68 |
ENST00000620395.2
|
immunoglobulin lambda variable 2-8 |
|
chr1_-_167518583 Show fit | 15.61 |
ENST00000392122.3
|
CD247 molecule |
|
chr1_-_153545793 Show fit | 15.29 |
ENST00000354332.8
ENST00000368716.9 |
S100 calcium binding protein A4 |
|
chr16_+_29662923 Show fit | 13.82 |
ENST00000395389.2
|
sialophorin |
|
chr8_-_132760548 Show fit | 13.78 |
ENST00000519187.5
ENST00000523829.5 ENST00000677595.1 ENST00000356838.7 ENST00000377901.8 ENST00000519304.1 |
transmembrane protein 71 |
|
chr1_+_153357846 Show fit | 12.44 |
ENST00000368738.4
|
S100 calcium binding protein A9 |
|
chr16_+_30472733 Show fit | 12.44 |
ENST00000356798.11
ENST00000433423.2 |
integrin subunit alpha L |
|
chr16_-_29745951 Show fit | 12.41 |
ENST00000329410.4
|
chromosome 16 open reading frame 54 |
|
chr10_-_70602759 Show fit | 12.22 |
ENST00000373209.2
|
perforin 1 |
|
chr10_-_70602731 Show fit | 12.03 |
ENST00000441259.2
|
perforin 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 230.6 | GO:0043312 | neutrophil activation involved in immune response(GO:0002283) neutrophil degranulation(GO:0043312) |
0.7 | 140.8 | GO:0002433 | immune response-regulating cell surface receptor signaling pathway involved in phagocytosis(GO:0002433) Fc-gamma receptor signaling pathway involved in phagocytosis(GO:0038096) |
0.8 | 119.3 | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane(GO:0006614) |
1.1 | 97.2 | GO:0006968 | cellular defense response(GO:0006968) |
0.6 | 48.2 | GO:0045576 | mast cell activation(GO:0045576) |
3.2 | 41.3 | GO:0002291 | T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell(GO:0002291) |
0.4 | 36.0 | GO:0045071 | negative regulation of viral genome replication(GO:0045071) |
7.0 | 35.0 | GO:0002357 | defense response to tumor cell(GO:0002357) |
0.2 | 33.9 | GO:0002220 | innate immune response activating cell surface receptor signaling pathway(GO:0002220) stimulatory C-type lectin receptor signaling pathway(GO:0002223) |
0.3 | 33.1 | GO:0002377 | immunoglobulin production(GO:0002377) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 163.7 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.0 | 152.1 | GO:0016021 | integral component of membrane(GO:0016021) |
1.5 | 100.0 | GO:0001772 | immunological synapse(GO:0001772) |
0.6 | 97.2 | GO:0035578 | azurophil granule lumen(GO:0035578) |
0.7 | 87.6 | GO:0101003 | ficolin-1-rich granule membrane(GO:0101003) |
0.7 | 83.1 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
0.0 | 80.6 | GO:0005887 | integral component of plasma membrane(GO:0005887) |
0.8 | 62.6 | GO:0022627 | cytosolic small ribosomal subunit(GO:0022627) |
2.0 | 54.7 | GO:0031254 | uropod(GO:0001931) cell trailing edge(GO:0031254) |
0.5 | 50.6 | GO:0030670 | phagocytic vesicle membrane(GO:0030670) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 132.2 | GO:0003823 | antigen binding(GO:0003823) |
0.2 | 103.0 | GO:0005096 | GTPase activator activity(GO:0005096) |
0.3 | 59.6 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
0.8 | 54.0 | GO:0005547 | phosphatidylinositol-3,4,5-trisphosphate binding(GO:0005547) |
4.5 | 49.4 | GO:0030369 | ICAM-3 receptor activity(GO:0030369) |
0.1 | 45.9 | GO:0030246 | carbohydrate binding(GO:0030246) |
0.4 | 44.2 | GO:0004715 | non-membrane spanning protein tyrosine kinase activity(GO:0004715) |
0.2 | 42.1 | GO:0001078 | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078) |
0.2 | 41.8 | GO:0005178 | integrin binding(GO:0005178) |
0.1 | 39.9 | GO:0005525 | GTP binding(GO:0005525) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.8 | 211.9 | PID CD8 TCR PATHWAY | TCR signaling in naïve CD8+ T cells |
1.7 | 108.3 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.9 | 83.2 | PID FCER1 PATHWAY | Fc-epsilon receptor I signaling in mast cells |
0.6 | 80.6 | PID RHOA REG PATHWAY | Regulation of RhoA activity |
0.1 | 49.2 | NABA SECRETED FACTORS | Genes encoding secreted soluble factors |
0.8 | 47.6 | PID IL8 CXCR2 PATHWAY | IL8- and CXCR2-mediated signaling events |
1.0 | 39.0 | PID TCR PATHWAY | TCR signaling in naïve CD4+ T cells |
0.4 | 38.9 | PID RAC1 PATHWAY | RAC1 signaling pathway |
0.9 | 38.8 | SA CASPASE CASCADE | Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade. |
0.1 | 36.8 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.7 | 199.5 | REACTOME IMMUNOREGULATORY INTERACTIONS BETWEEN A LYMPHOID AND A NON LYMPHOID CELL | Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell |
0.4 | 109.4 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
3.1 | 89.9 | REACTOME PHOSPHORYLATION OF CD3 AND TCR ZETA CHAINS | Genes involved in Phosphorylation of CD3 and TCR zeta chains |
1.1 | 84.4 | REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX | Genes involved in Formation of the ternary complex, and subsequently, the 43S complex |
0.8 | 79.4 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |
0.7 | 64.4 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.8 | 57.6 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
1.3 | 43.0 | REACTOME GENERATION OF SECOND MESSENGER MOLECULES | Genes involved in Generation of second messenger molecules |
0.7 | 38.5 | REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS | Genes involved in Antigen Activates B Cell Receptor Leading to Generation of Second Messengers |
0.2 | 38.3 | REACTOME MRNA SPLICING | Genes involved in mRNA Splicing |