Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
ESRRA | hg38_v1_chr11_+_64305550_64305584 | 0.58 | 5.2e-04 | Click! |
ESR2 | hg38_v1_chr14_-_64338096_64338124 | -0.29 | 1.1e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_-_173917281 Show fit | 17.31 |
ENST00000367698.4
|
serpin family C member 1 |
|
chr9_-_114078293 Show fit | 13.67 |
ENST00000265132.8
|
alpha-1-microglobulin/bikunin precursor |
|
chr1_+_159587817 Show fit | 10.83 |
ENST00000255040.3
|
amyloid P component, serum |
|
chr20_+_38346474 Show fit | 10.20 |
ENST00000217407.3
|
lipopolysaccharide binding protein |
|
chr3_-_52452828 Show fit | 9.98 |
ENST00000496590.1
|
troponin C1, slow skeletal and cardiac type |
|
chr4_-_154612635 Show fit | 9.86 |
ENST00000407946.5
ENST00000405164.5 ENST00000336098.8 ENST00000393846.6 ENST00000404648.7 ENST00000443553.5 |
fibrinogen gamma chain |
|
chr17_+_4951080 Show fit | 9.82 |
ENST00000521811.5
ENST00000323997.10 ENST00000522249.5 ENST00000519584.5 ENST00000519602.6 |
enolase 3 |
|
chr17_+_4950147 Show fit | 9.63 |
ENST00000522301.5
|
enolase 3 |
|
chr9_-_101430861 Show fit | 8.52 |
ENST00000649902.1
|
aldolase, fructose-bisphosphate B |
|
chr11_+_116829898 Show fit | 8.22 |
ENST00000227667.8
ENST00000375345.3 |
apolipoprotein C3 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 58.1 | GO:0006910 | phagocytosis, recognition(GO:0006910) |
0.2 | 52.8 | GO:0002250 | adaptive immune response(GO:0002250) |
0.1 | 47.8 | GO:0043312 | neutrophil activation involved in immune response(GO:0002283) neutrophil degranulation(GO:0043312) |
0.7 | 41.9 | GO:0030212 | hyaluronan metabolic process(GO:0030212) |
1.3 | 40.4 | GO:0007597 | blood coagulation, intrinsic pathway(GO:0007597) |
0.4 | 37.9 | GO:0006968 | cellular defense response(GO:0006968) |
0.2 | 35.7 | GO:0002377 | immunoglobulin production(GO:0002377) |
0.1 | 32.8 | GO:0050911 | detection of chemical stimulus involved in sensory perception of smell(GO:0050911) |
0.3 | 30.5 | GO:0070125 | mitochondrial translational elongation(GO:0070125) |
0.5 | 29.4 | GO:0006953 | acute-phase response(GO:0006953) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 127.1 | GO:0005789 | endoplasmic reticulum membrane(GO:0005789) |
0.5 | 87.3 | GO:0072562 | blood microparticle(GO:0072562) |
0.2 | 80.5 | GO:0005759 | mitochondrial matrix(GO:0005759) |
0.5 | 52.3 | GO:0033116 | endoplasmic reticulum-Golgi intermediate compartment membrane(GO:0033116) |
0.9 | 49.2 | GO:0042571 | immunoglobulin complex, circulating(GO:0042571) |
0.5 | 39.3 | GO:0031907 | peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907) |
0.3 | 38.3 | GO:0101003 | ficolin-1-rich granule membrane(GO:0101003) |
0.1 | 34.3 | GO:0005743 | mitochondrial inner membrane(GO:0005743) |
1.5 | 32.0 | GO:0042627 | chylomicron(GO:0042627) |
0.3 | 31.7 | GO:0035580 | specific granule lumen(GO:0035580) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 106.0 | GO:0003823 | antigen binding(GO:0003823) |
0.6 | 92.7 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.9 | 61.6 | GO:0034987 | immunoglobulin receptor binding(GO:0034987) |
0.3 | 38.5 | GO:0005070 | SH3/SH2 adaptor activity(GO:0005070) |
0.1 | 36.9 | GO:0005125 | cytokine activity(GO:0005125) |
0.1 | 33.2 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
0.1 | 32.8 | GO:0004984 | olfactory receptor activity(GO:0004984) |
0.7 | 31.3 | GO:0001972 | retinoic acid binding(GO:0001972) |
2.1 | 29.3 | GO:0031014 | troponin T binding(GO:0031014) |
0.3 | 28.9 | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors(GO:0016667) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 84.6 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.7 | 66.4 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.8 | 53.2 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.5 | 52.7 | PID CD8 TCR PATHWAY | TCR signaling in naïve CD8+ T cells |
0.5 | 45.5 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.3 | 28.9 | PID IL6 7 PATHWAY | IL6-mediated signaling events |
0.4 | 25.7 | PID GLYPICAN 1PATHWAY | Glypican 1 network |
0.3 | 24.0 | PID ARF6 PATHWAY | Arf6 signaling events |
0.7 | 18.2 | PID TCR JNK PATHWAY | JNK signaling in the CD4+ TCR pathway |
0.2 | 17.8 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 62.0 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
0.6 | 59.7 | REACTOME IMMUNOREGULATORY INTERACTIONS BETWEEN A LYMPHOID AND A NON LYMPHOID CELL | Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell |
2.7 | 50.9 | REACTOME COMMON PATHWAY | Genes involved in Common Pathway |
1.9 | 48.6 | REACTOME CHYLOMICRON MEDIATED LIPID TRANSPORT | Genes involved in Chylomicron-mediated lipid transport |
0.6 | 48.3 | REACTOME GLUCONEOGENESIS | Genes involved in Gluconeogenesis |
0.6 | 45.2 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.5 | 44.6 | REACTOME RESPIRATORY ELECTRON TRANSPORT ATP SYNTHESIS BY CHEMIOSMOTIC COUPLING AND HEAT PRODUCTION BY UNCOUPLING PROTEINS | Genes involved in Respiratory electron transport, ATP synthesis by chemiosmotic coupling, and heat production by uncoupling proteins. |
2.0 | 35.4 | REACTOME XENOBIOTICS | Genes involved in Xenobiotics |
0.3 | 34.9 | REACTOME INTERFERON GAMMA SIGNALING | Genes involved in Interferon gamma signaling |
0.3 | 31.0 | REACTOME METABOLISM OF VITAMINS AND COFACTORS | Genes involved in Metabolism of vitamins and cofactors |