Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
FOXA3 | hg38_v1_chr19_+_45864318_45864334 | 0.59 | 4.1e-04 | Click! |
FOXC2 | hg38_v1_chr16_+_86566821_86566836 | 0.01 | 9.6e-01 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.0 | 15.8 | GO:0006957 | complement activation, alternative pathway(GO:0006957) |
2.7 | 13.4 | GO:0010193 | response to ozone(GO:0010193) |
0.8 | 8.9 | GO:0060267 | positive regulation of respiratory burst(GO:0060267) |
2.1 | 8.4 | GO:0051919 | positive regulation of fibrinolysis(GO:0051919) |
0.9 | 8.4 | GO:0030450 | regulation of complement activation, classical pathway(GO:0030450) negative regulation of complement activation, classical pathway(GO:0045959) |
1.6 | 7.9 | GO:0010903 | negative regulation of very-low-density lipoprotein particle remodeling(GO:0010903) |
0.7 | 7.9 | GO:0060665 | regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling(GO:0060665) |
0.5 | 6.5 | GO:0071847 | TNFSF11-mediated signaling pathway(GO:0071847) |
0.1 | 6.1 | GO:0036075 | endochondral ossification(GO:0001958) replacement ossification(GO:0036075) |
1.9 | 5.7 | GO:0001970 | positive regulation of activation of membrane attack complex(GO:0001970) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 22.4 | GO:0005615 | extracellular space(GO:0005615) |
2.4 | 21.4 | GO:0005579 | membrane attack complex(GO:0005579) |
0.1 | 19.4 | GO:0031093 | platelet alpha granule lumen(GO:0031093) |
0.1 | 12.7 | GO:0005791 | rough endoplasmic reticulum(GO:0005791) |
0.1 | 9.1 | GO:0005581 | collagen trimer(GO:0005581) |
2.2 | 8.9 | GO:0071757 | hexameric IgM immunoglobulin complex(GO:0071757) |
0.1 | 8.4 | GO:0044217 | other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217) |
2.0 | 7.9 | GO:0034365 | discoidal high-density lipoprotein particle(GO:0034365) |
0.0 | 7.3 | GO:0016323 | basolateral plasma membrane(GO:0016323) |
2.0 | 6.1 | GO:0005600 | collagen type XIII trimer(GO:0005600) transmembrane collagen trimer(GO:0030936) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 14.9 | GO:0042056 | chemoattractant activity(GO:0042056) |
0.1 | 14.4 | GO:0008201 | heparin binding(GO:0008201) |
1.5 | 13.4 | GO:0019834 | phospholipase A2 inhibitor activity(GO:0019834) |
1.3 | 8.9 | GO:0019862 | IgA binding(GO:0019862) |
1.6 | 7.9 | GO:0070653 | high-density lipoprotein particle receptor binding(GO:0070653) |
0.0 | 7.5 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.2 | 6.6 | GO:0004190 | aspartic-type endopeptidase activity(GO:0004190) |
1.0 | 4.8 | GO:0005350 | pyrimidine nucleobase transmembrane transporter activity(GO:0005350) |
0.6 | 4.8 | GO:0035473 | lipase binding(GO:0035473) |
0.1 | 4.8 | GO:0001972 | retinoic acid binding(GO:0001972) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 24.2 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.1 | 14.1 | PID SYNDECAN 1 PATHWAY | Syndecan-1-mediated signaling events |
0.0 | 12.9 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 11.4 | PID CD40 PATHWAY | CD40/CD40L signaling |
0.1 | 10.8 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.0 | 9.1 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.1 | 6.0 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.1 | 4.8 | NABA BASEMENT MEMBRANES | Genes encoding structural components of basement membranes |
0.1 | 4.6 | PID RET PATHWAY | Signaling events regulated by Ret tyrosine kinase |
0.1 | 3.7 | PID AMB2 NEUTROPHILS PATHWAY | amb2 Integrin signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 29.8 | REACTOME COMPLEMENT CASCADE | Genes involved in Complement cascade |
0.5 | 12.7 | REACTOME CHYLOMICRON MEDIATED LIPID TRANSPORT | Genes involved in Chylomicron-mediated lipid transport |
0.6 | 9.4 | REACTOME COMMON PATHWAY | Genes involved in Common Pathway |
0.2 | 7.9 | REACTOME IL 7 SIGNALING | Genes involved in Interleukin-7 signaling |
0.1 | 6.5 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.1 | 6.2 | REACTOME TIGHT JUNCTION INTERACTIONS | Genes involved in Tight junction interactions |
0.2 | 5.9 | REACTOME INTRINSIC PATHWAY | Genes involved in Intrinsic Pathway |
0.3 | 5.7 | REACTOME RECYCLING OF BILE ACIDS AND SALTS | Genes involved in Recycling of bile acids and salts |
0.3 | 4.8 | REACTOME PASSIVE TRANSPORT BY AQUAPORINS | Genes involved in Passive Transport by Aquaporins |
0.1 | 4.2 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |