Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
FOXO3 | hg38_v1_chr6_+_108656346_108656359 | 0.12 | 5.0e-01 | Click! |
FOXD2 | hg38_v1_chr1_+_47438036_47438112 | -0.06 | 7.3e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr6_-_159045104 Show fit | 5.94 |
ENST00000326965.7
|
T cell activation RhoGTPase activating protein |
|
chr6_-_159044980 Show fit | 5.57 |
ENST00000367066.8
|
T cell activation RhoGTPase activating protein |
|
chr1_+_84164962 Show fit | 5.51 |
ENST00000614872.4
ENST00000394839.6 |
protein kinase cAMP-activated catalytic subunit beta |
|
chr6_-_159045010 Show fit | 5.43 |
ENST00000338313.5
|
T cell activation RhoGTPase activating protein |
|
chr4_-_163613505 Show fit | 5.40 |
ENST00000339875.9
|
membrane associated ring-CH-type finger 1 |
|
chr1_+_84164891 Show fit | 5.33 |
ENST00000413538.5
ENST00000417530.5 |
protein kinase cAMP-activated catalytic subunit beta |
|
chr8_+_31639755 Show fit | 4.56 |
ENST00000520407.5
|
neuregulin 1 |
|
chr1_+_116754422 Show fit | 4.40 |
ENST00000369478.4
ENST00000369477.1 |
CD2 molecule |
|
chr22_+_39946812 Show fit | 4.37 |
ENST00000407075.3
|
GRB2 related adaptor protein 2 |
|
chr1_+_40396766 Show fit | 4.27 |
ENST00000539317.2
|
small ArfGAP2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.5 | 24.8 | GO:0097338 | response to clozapine(GO:0097338) |
0.0 | 11.4 | GO:0051056 | regulation of small GTPase mediated signal transduction(GO:0051056) |
1.4 | 10.0 | GO:0071477 | hypotonic salinity response(GO:0042539) cellular hypotonic salinity response(GO:0071477) |
0.9 | 7.9 | GO:0035696 | monocyte extravasation(GO:0035696) |
0.5 | 7.7 | GO:0021842 | directional guidance of interneurons involved in migration from the subpallium to the cortex(GO:0021840) chemorepulsion involved in interneuron migration from the subpallium to the cortex(GO:0021842) ERBB3 signaling pathway(GO:0038129) |
0.4 | 7.6 | GO:0072619 | interleukin-21 production(GO:0032625) interleukin-21 secretion(GO:0072619) |
0.2 | 7.3 | GO:1904886 | beta-catenin destruction complex disassembly(GO:1904886) |
2.1 | 6.3 | GO:0045957 | regulation of complement activation, alternative pathway(GO:0030451) negative regulation of complement activation, alternative pathway(GO:0045957) |
1.0 | 5.8 | GO:0010157 | response to chlorate(GO:0010157) |
0.3 | 5.5 | GO:0021796 | cerebral cortex regionalization(GO:0021796) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 25.4 | GO:0005952 | cAMP-dependent protein kinase complex(GO:0005952) |
0.0 | 17.1 | GO:0016607 | nuclear speck(GO:0016607) |
0.1 | 7.9 | GO:0030673 | axolemma(GO:0030673) |
0.0 | 6.9 | GO:0005769 | early endosome(GO:0005769) |
0.0 | 6.0 | GO:0005802 | trans-Golgi network(GO:0005802) |
0.5 | 5.8 | GO:0044294 | dendritic growth cone(GO:0044294) |
0.3 | 5.5 | GO:0097451 | glial limiting end-foot(GO:0097451) |
0.5 | 5.1 | GO:0000798 | nuclear cohesin complex(GO:0000798) |
0.0 | 5.0 | GO:0035578 | azurophil granule lumen(GO:0035578) |
0.0 | 5.0 | GO:0009897 | external side of plasma membrane(GO:0009897) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.0 | 25.3 | GO:0004691 | cAMP-dependent protein kinase activity(GO:0004691) |
0.0 | 22.4 | GO:0005096 | GTPase activator activity(GO:0005096) |
0.6 | 10.0 | GO:0022820 | potassium:chloride symporter activity(GO:0015379) potassium ion symporter activity(GO:0022820) |
0.4 | 8.8 | GO:0005176 | ErbB-2 class receptor binding(GO:0005176) |
0.0 | 8.7 | GO:0001078 | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078) |
0.1 | 7.9 | GO:0043621 | protein self-association(GO:0043621) |
0.0 | 7.9 | GO:0061630 | ubiquitin protein ligase activity(GO:0061630) |
0.1 | 7.8 | GO:0004722 | protein serine/threonine phosphatase activity(GO:0004722) |
2.1 | 6.3 | GO:0001861 | complement component C4b receptor activity(GO:0001861) complement component C3b receptor activity(GO:0004877) |
0.8 | 5.8 | GO:0097108 | smoothened binding(GO:0005119) hedgehog family protein binding(GO:0097108) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 25.1 | PID IL3 PATHWAY | IL3-mediated signaling events |
0.2 | 10.0 | ST ERK1 ERK2 MAPK PATHWAY | ERK1/ERK2 MAPK Pathway |
0.1 | 9.7 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.1 | 8.3 | PID MAPK TRK PATHWAY | Trk receptor signaling mediated by the MAPK pathway |
0.3 | 8.0 | PID TCR JNK PATHWAY | JNK signaling in the CD4+ TCR pathway |
0.2 | 7.8 | PID IL2 STAT5 PATHWAY | IL2 signaling events mediated by STAT5 |
0.1 | 7.8 | PID CMYB PATHWAY | C-MYB transcription factor network |
0.2 | 7.6 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
0.1 | 6.6 | PID ATR PATHWAY | ATR signaling pathway |
0.2 | 6.1 | PID HEDGEHOG 2PATHWAY | Signaling events mediated by the Hedgehog family |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 24.2 | REACTOME HORMONE SENSITIVE LIPASE HSL MEDIATED TRIACYLGLYCEROL HYDROLYSIS | Genes involved in Hormone-sensitive lipase (HSL)-mediated triacylglycerol hydrolysis |
0.1 | 19.1 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.0 | 9.7 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.2 | 8.5 | REACTOME CTNNB1 PHOSPHORYLATION CASCADE | Genes involved in Beta-catenin phosphorylation cascade |
0.2 | 7.9 | REACTOME DOWNREGULATION OF ERBB2 ERBB3 SIGNALING | Genes involved in Downregulation of ERBB2:ERBB3 signaling |
0.1 | 7.5 | REACTOME GENERATION OF SECOND MESSENGER MOLECULES | Genes involved in Generation of second messenger molecules |
0.1 | 7.3 | REACTOME NOTCH1 INTRACELLULAR DOMAIN REGULATES TRANSCRIPTION | Genes involved in NOTCH1 Intracellular Domain Regulates Transcription |
0.2 | 7.2 | REACTOME ERK MAPK TARGETS | Genes involved in ERK/MAPK targets |
0.0 | 7.0 | REACTOME G ALPHA I SIGNALLING EVENTS | Genes involved in G alpha (i) signalling events |
0.1 | 6.7 | REACTOME SYNTHESIS OF PIPS AT THE PLASMA MEMBRANE | Genes involved in Synthesis of PIPs at the plasma membrane |