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Illumina Body Map 2 (GSE30611)

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Results for GGACGGA

Z-value: 0.09

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miRNA associated with seed GGACGGA

NamemiRBASE accession
MIMAT0000454

Activity profile of GGACGGA motif

Sorted Z-values of GGACGGA motif

Promoter Log-likelihood Transcript Gene Gene Info
chr11_+_117178728 0.12 ENST00000532960.5
ENST00000324225.9
SID1 transmembrane family member 2
chr11_-_64778502 0.12 ENST00000681407.1
ENST00000377390.8
splicing factor 1
chr5_-_173328407 0.06 ENST00000265087.9
stanniocalcin 2
chr4_-_173530219 0.06 ENST00000359562.4
heart and neural crest derivatives expressed 2
chr1_-_56579555 0.06 ENST00000371250.4
phospholipid phosphatase 3
chr6_+_117675448 0.06 ENST00000368494.4
NUS1 dehydrodolichyl diphosphate synthase subunit
chr12_+_53180679 0.05 ENST00000416904.5
zinc finger protein 740
chr8_-_140635617 0.05 ENST00000220592.10
argonaute RISC catalytic component 2
chr22_-_38872206 0.04 ENST00000407418.8
ENST00000216083.6
chromobox 6
chr19_+_55605639 0.04 ENST00000568956.2
zinc finger protein 865
chr1_-_18902520 0.04 ENST00000538839.5
ENST00000290597.9
ENST00000375341.8
aldehyde dehydrogenase 4 family member A1
chr19_+_10871516 0.03 ENST00000327064.9
ENST00000588947.5
coactivator associated arginine methyltransferase 1
chr12_+_120687118 0.02 ENST00000228506.8
ENST00000412616.2
malectin
chr20_-_32483438 0.02 ENST00000359676.9
nucleolar protein 4 like
chr22_+_40177917 0.01 ENST00000454349.7
ENST00000335727.13
trinucleotide repeat containing adaptor 6B
chr12_-_124495252 0.01 ENST00000405201.5
nuclear receptor corepressor 2
chr3_-_147406520 0.00 ENST00000463250.1
ENST00000383075.8
Zic family member 4

Network of associatons between targets according to the STRING database.

First level regulatory network of GGACGGA

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0016094 polyprenol biosynthetic process(GO:0016094)
0.0 0.1 GO:0003219 cardiac right ventricle formation(GO:0003219) visceral serous pericardium development(GO:0061032)
0.0 0.1 GO:0000389 mRNA 3'-splice site recognition(GO:0000389)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0045131 pre-mRNA branch point binding(GO:0045131)
0.0 0.1 GO:0051032 nucleic acid transmembrane transporter activity(GO:0051032) RNA transmembrane transporter activity(GO:0051033)