Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
GSC | hg38_v1_chr14_-_94770102_94770130 | -0.51 | 2.8e-03 | Click! |
GSC2 | hg38_v1_chr22_-_19150292_19150292 | 0.16 | 3.7e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr11_+_61755372 Show fit | 2.96 |
ENST00000265460.9
|
myelin regulatory factor |
|
chr15_-_26939518 Show fit | 2.75 |
ENST00000541819.6
|
gamma-aminobutyric acid type A receptor subunit beta3 |
|
chr3_-_10505508 Show fit | 2.46 |
ENST00000643662.1
ENST00000397077.6 ENST00000360273.7 |
ATPase plasma membrane Ca2+ transporting 2 |
|
chr6_+_34466059 Show fit | 2.37 |
ENST00000620693.4
ENST00000244458.7 ENST00000374043.6 |
protein kinase C and casein kinase substrate in neurons 1 |
|
chr9_+_100442271 Show fit | 2.09 |
ENST00000502978.1
|
MSANTD3-TMEFF1 readthrough |
|
chr17_+_70104848 Show fit | 2.00 |
ENST00000392670.5
|
potassium inwardly rectifying channel subfamily J member 16 |
|
chr3_-_179974078 Show fit | 1.97 |
ENST00000464614.5
ENST00000476138.5 ENST00000463761.1 |
peroxisomal biogenesis factor 5 like |
|
chr17_+_70104991 Show fit | 1.81 |
ENST00000587698.5
ENST00000587892.1 |
potassium inwardly rectifying channel subfamily J member 16 |
|
chr7_+_29122274 Show fit | 1.76 |
ENST00000582692.2
ENST00000644824.1 |
novel transcript, antisense to CPVL chimerin 2 |
|
chr10_-_102418748 Show fit | 1.75 |
ENST00000020673.6
|
pleckstrin and Sec7 domain containing |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 4.7 | GO:0071420 | cellular response to histamine(GO:0071420) |
0.3 | 4.6 | GO:1902866 | regulation of retina development in camera-type eye(GO:1902866) |
0.1 | 4.3 | GO:0010107 | potassium ion import(GO:0010107) |
0.3 | 3.4 | GO:0016560 | protein import into peroxisome matrix, docking(GO:0016560) |
0.1 | 3.2 | GO:0008045 | motor neuron axon guidance(GO:0008045) |
0.6 | 3.0 | GO:0008078 | mesodermal cell migration(GO:0008078) axial mesoderm morphogenesis(GO:0048319) |
0.2 | 3.0 | GO:0032286 | central nervous system myelin maintenance(GO:0032286) |
0.0 | 2.8 | GO:0007286 | spermatid development(GO:0007286) |
0.0 | 2.5 | GO:1903779 | regulation of cardiac conduction(GO:1903779) |
0.0 | 2.4 | GO:0048488 | synaptic vesicle endocytosis(GO:0048488) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.7 | GO:1902711 | GABA-A receptor complex(GO:1902711) |
0.0 | 4.4 | GO:0008076 | voltage-gated potassium channel complex(GO:0008076) |
0.0 | 4.3 | GO:0005778 | peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903) |
0.1 | 2.5 | GO:0030137 | COPI-coated vesicle(GO:0030137) |
0.0 | 2.2 | GO:0032587 | ruffle membrane(GO:0032587) |
0.0 | 1.8 | GO:0005901 | caveola(GO:0005901) |
0.0 | 1.7 | GO:0097610 | cleavage furrow(GO:0032154) cell surface furrow(GO:0097610) |
0.0 | 1.5 | GO:0000159 | protein phosphatase type 2A complex(GO:0000159) |
0.0 | 1.4 | GO:0043198 | dendritic shaft(GO:0043198) |
0.3 | 1.3 | GO:0032127 | dense core granule membrane(GO:0032127) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 4.7 | GO:0022851 | GABA-gated chloride ion channel activity(GO:0022851) |
0.5 | 4.6 | GO:0042835 | BRE binding(GO:0042835) |
0.0 | 4.3 | GO:0005200 | structural constituent of cytoskeleton(GO:0005200) |
0.2 | 3.8 | GO:0015467 | G-protein activated inward rectifier potassium channel activity(GO:0015467) |
0.4 | 3.4 | GO:0005052 | peroxisome matrix targeting signal-1 binding(GO:0005052) |
0.1 | 3.3 | GO:0005388 | calcium-transporting ATPase activity(GO:0005388) |
0.0 | 3.2 | GO:0046875 | ephrin receptor binding(GO:0046875) |
0.0 | 2.8 | GO:0042826 | histone deacetylase binding(GO:0042826) |
0.0 | 2.6 | GO:0005089 | Rho guanyl-nucleotide exchange factor activity(GO:0005089) |
0.4 | 2.0 | GO:0004105 | choline-phosphate cytidylyltransferase activity(GO:0004105) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.1 | PID RAC1 REG PATHWAY | Regulation of RAC1 activity |
0.0 | 1.8 | PID RHODOPSIN PATHWAY | Visual signal transduction: Rods |
0.0 | 1.6 | ST GA12 PATHWAY | G alpha 12 Pathway |
0.0 | 1.5 | PID ATR PATHWAY | ATR signaling pathway |
0.0 | 1.2 | ST WNT CA2 CYCLIC GMP PATHWAY | Wnt/Ca2+/cyclic GMP signaling. |
0.0 | 1.0 | SA PTEN PATHWAY | PTEN is a tumor suppressor that dephosphorylates the lipid messenger phosphatidylinositol triphosphate. |
0.0 | 1.0 | PID P53 REGULATION PATHWAY | p53 pathway |
0.0 | 0.7 | PID PRL SIGNALING EVENTS PATHWAY | Signaling events mediated by PRL |
0.0 | 0.7 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.0 | 0.6 | PID P38 MKK3 6PATHWAY | p38 MAPK signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.7 | REACTOME GABA A RECEPTOR ACTIVATION | Genes involved in GABA A receptor activation |
0.1 | 3.2 | REACTOME ORGANIC CATION ANION ZWITTERION TRANSPORT | Genes involved in Organic cation/anion/zwitterion transport |
0.0 | 3.0 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.0 | 2.7 | REACTOME G ALPHA1213 SIGNALLING EVENTS | Genes involved in G alpha (12/13) signalling events |
0.1 | 2.5 | REACTOME PLATELET CALCIUM HOMEOSTASIS | Genes involved in Platelet calcium homeostasis |
0.1 | 2.0 | REACTOME SYNTHESIS OF PC | Genes involved in Synthesis of PC |
0.0 | 1.7 | REACTOME INWARDLY RECTIFYING K CHANNELS | Genes involved in Inwardly rectifying K+ channels |
0.0 | 1.4 | REACTOME TRAFFICKING OF GLUR2 CONTAINING AMPA RECEPTORS | Genes involved in Trafficking of GluR2-containing AMPA receptors |
0.1 | 1.3 | REACTOME RECRUITMENT OF NUMA TO MITOTIC CENTROSOMES | Genes involved in Recruitment of NuMA to mitotic centrosomes |
0.1 | 1.2 | REACTOME G BETA GAMMA SIGNALLING THROUGH PLC BETA | Genes involved in G beta:gamma signalling through PLC beta |