Illumina Body Map 2 (GSE30611)
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr5_+_111224374 Show fit | 3.29 |
ENST00000282356.9
|
calcium/calmodulin dependent protein kinase IV |
|
chr14_-_99272184 Show fit | 2.71 |
ENST00000357195.8
|
BAF chromatin remodeling complex subunit BCL11B |
|
chr2_+_181457342 Show fit | 2.51 |
ENST00000397033.7
ENST00000233573.6 |
integrin subunit alpha 4 |
|
chr5_-_157575767 Show fit | 2.44 |
ENST00000257527.9
|
ADAM metallopeptidase domain 19 |
|
chr10_-_22714531 Show fit | 2.36 |
ENST00000376573.9
|
phosphatidylinositol-5-phosphate 4-kinase type 2 alpha |
|
chr18_+_54828406 Show fit | 2.32 |
ENST00000262094.10
|
RAB27B, member RAS oncogene family |
|
chr2_-_174634566 Show fit | 2.24 |
ENST00000392547.6
|
WAS/WASL interacting protein family member 1 |
|
chr16_-_84618067 Show fit | 2.05 |
ENST00000262428.5
|
coactosin like F-actin binding protein 1 |
|
chr6_-_30687200 Show fit | 2.05 |
ENST00000399199.7
|
protein phosphatase 1 regulatory subunit 18 |
|
chr12_+_94148553 Show fit | 2.00 |
ENST00000258526.9
|
plexin C1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.9 | GO:0038096 | immune response-regulating cell surface receptor signaling pathway involved in phagocytosis(GO:0002433) Fc-gamma receptor signaling pathway involved in phagocytosis(GO:0038096) |
1.1 | 3.3 | GO:0002372 | myeloid dendritic cell cytokine production(GO:0002372) |
0.7 | 2.7 | GO:0097534 | lymphoid lineage cell migration(GO:0097534) lymphoid lineage cell migration into thymus(GO:0097535) |
0.5 | 2.5 | GO:0003366 | cell-matrix adhesion involved in ameboidal cell migration(GO:0003366) |
0.5 | 2.3 | GO:0018242 | protein O-linked glycosylation via serine(GO:0018242) |
0.1 | 2.3 | GO:0071985 | multivesicular body sorting pathway(GO:0071985) |
0.2 | 2.2 | GO:2000786 | positive regulation of autophagosome assembly(GO:2000786) |
0.1 | 2.2 | GO:0001675 | acrosome assembly(GO:0001675) |
0.0 | 2.1 | GO:0050832 | defense response to fungus(GO:0050832) |
0.2 | 2.0 | GO:0035279 | mRNA cleavage involved in gene silencing by miRNA(GO:0035279) mRNA cleavage involved in gene silencing(GO:0098795) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.9 | GO:0000118 | histone deacetylase complex(GO:0000118) |
0.0 | 3.9 | GO:0005834 | heterotrimeric G-protein complex(GO:0005834) |
0.1 | 3.8 | GO:0042588 | zymogen granule(GO:0042588) |
0.0 | 3.8 | GO:0032580 | Golgi cisterna membrane(GO:0032580) |
0.5 | 2.5 | GO:0034669 | integrin alpha4-beta7 complex(GO:0034669) |
0.0 | 2.4 | GO:0101002 | ficolin-1-rich granule(GO:0101002) ficolin-1-rich granule lumen(GO:1904813) |
0.0 | 2.3 | GO:0005776 | autophagosome(GO:0005776) |
0.0 | 2.2 | GO:0005871 | kinesin complex(GO:0005871) |
0.2 | 2.0 | GO:0005955 | calcineurin complex(GO:0005955) |
0.0 | 1.9 | GO:0001917 | photoreceptor inner segment(GO:0001917) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 12.1 | GO:0001227 | transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227) |
0.1 | 4.6 | GO:0031489 | myosin V binding(GO:0031489) |
0.0 | 4.3 | GO:0004407 | histone deacetylase activity(GO:0004407) |
0.0 | 3.8 | GO:0005070 | SH3/SH2 adaptor activity(GO:0005070) |
0.2 | 3.3 | GO:0009931 | calcium-dependent protein serine/threonine kinase activity(GO:0009931) |
0.1 | 3.2 | GO:0017091 | AU-rich element binding(GO:0017091) |
0.1 | 3.1 | GO:0061631 | ubiquitin conjugating enzyme activity(GO:0061631) |
0.1 | 2.9 | GO:0046625 | sphingolipid binding(GO:0046625) |
0.0 | 2.9 | GO:0003777 | microtubule motor activity(GO:0003777) |
0.1 | 2.6 | GO:0004653 | polypeptide N-acetylgalactosaminyltransferase activity(GO:0004653) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.0 | PID HDAC CLASSII PATHWAY | Signaling events mediated by HDAC Class II |
0.1 | 3.5 | PID TCR CALCIUM PATHWAY | Calcium signaling in the CD4+ TCR pathway |
0.1 | 3.3 | PID S1P S1P4 PATHWAY | S1P4 pathway |
0.1 | 2.6 | PID TCR JNK PATHWAY | JNK signaling in the CD4+ TCR pathway |
0.1 | 2.6 | SA B CELL RECEPTOR COMPLEXES | Antigen binding to B cell receptors activates protein tyrosine kinases, such as the Src family, which ultimate activate MAP kinases. |
0.1 | 2.5 | PID INTEGRIN5 PATHWAY | Beta5 beta6 beta7 and beta8 integrin cell surface interactions |
0.0 | 2.3 | PID FCER1 PATHWAY | Fc-epsilon receptor I signaling in mast cells |
0.0 | 2.2 | PID TCR PATHWAY | TCR signaling in naïve CD4+ T cells |
0.0 | 2.0 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.0 | 1.9 | PID ARF6 PATHWAY | Arf6 signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.9 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.1 | 3.8 | REACTOME DAG AND IP3 SIGNALING | Genes involved in DAG and IP3 signaling |
0.0 | 3.8 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.1 | 3.7 | REACTOME REGULATION OF SIGNALING BY CBL | Genes involved in Regulation of signaling by CBL |
0.1 | 3.3 | REACTOME INHIBITION OF INSULIN SECRETION BY ADRENALINE NORADRENALINE | Genes involved in Inhibition of Insulin Secretion by Adrenaline/Noradrenaline |
0.0 | 2.8 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.0 | 2.5 | REACTOME O LINKED GLYCOSYLATION OF MUCINS | Genes involved in O-linked glycosylation of mucins |
0.0 | 2.4 | REACTOME SYNTHESIS OF PIPS AT THE PLASMA MEMBRANE | Genes involved in Synthesis of PIPs at the plasma membrane |
0.0 | 2.3 | REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS | Genes involved in Class B/2 (Secretin family receptors) |
0.1 | 2.2 | REACTOME PRE NOTCH TRANSCRIPTION AND TRANSLATION | Genes involved in Pre-NOTCH Transcription and Translation |