Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
HBP1 | hg38_v1_chr7_+_107168961_107169010 | -0.29 | 1.1e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_+_4198075 Show fit | 3.79 |
ENST00000262970.9
|
ankyrin repeat domain 24 |
|
chr2_+_231037500 Show fit | 3.14 |
ENST00000373640.5
|
chromosome 2 open reading frame 72 |
|
chr10_-_20897288 Show fit | 2.70 |
ENST00000377122.9
|
nebulette |
|
chr4_-_23881282 Show fit | 2.69 |
ENST00000613098.4
|
PPARG coactivator 1 alpha |
|
chr17_+_70075215 Show fit | 2.65 |
ENST00000283936.5
ENST00000615244.4 ENST00000392671.6 |
potassium inwardly rectifying channel subfamily J member 16 |
|
chr2_-_73642413 Show fit | 2.54 |
ENST00000272425.4
|
N-acetyltransferase 8 (putative) |
|
chr17_+_4950147 Show fit | 2.53 |
ENST00000522301.5
|
enolase 3 |
|
chr11_-_66958366 Show fit | 2.26 |
ENST00000651036.1
ENST00000652125.1 ENST00000531614.6 ENST00000524491.6 ENST00000529047.6 ENST00000393960.7 ENST00000393958.7 ENST00000528403.6 ENST00000651854.1 |
pyruvate carboxylase |
|
chr11_+_124919244 Show fit | 2.20 |
ENST00000408930.6
|
hepatocellular carcinoma, down-regulated 1 |
|
chr9_-_6605338 Show fit | 2.08 |
ENST00000638654.1
|
glycine decarboxylase |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 8.3 | GO:0003301 | physiological muscle hypertrophy(GO:0003298) physiological cardiac muscle hypertrophy(GO:0003301) cell growth involved in cardiac muscle cell development(GO:0061049) |
0.1 | 5.6 | GO:0010107 | potassium ion import(GO:0010107) |
1.2 | 4.7 | GO:0042450 | arginine biosynthetic process via ornithine(GO:0042450) |
0.8 | 4.7 | GO:1903314 | nitrogen catabolite regulation of transcription from RNA polymerase II promoter(GO:0001079) nitrogen catabolite activation of transcription from RNA polymerase II promoter(GO:0001080) regulation of urea metabolic process(GO:0034255) intracellular bile acid receptor signaling pathway(GO:0038185) interleukin-17 secretion(GO:0072615) nitrogen catabolite regulation of transcription(GO:0090293) nitrogen catabolite activation of transcription(GO:0090294) regulation of nitrogen cycle metabolic process(GO:1903314) positive regulation of glutamate metabolic process(GO:2000213) regulation of ammonia assimilation cycle(GO:2001248) positive regulation of ammonia assimilation cycle(GO:2001250) |
0.4 | 4.3 | GO:0038044 | transforming growth factor-beta secretion(GO:0038044) |
0.8 | 3.0 | GO:0019520 | aldonic acid metabolic process(GO:0019520) D-gluconate metabolic process(GO:0019521) |
0.5 | 3.0 | GO:0008218 | bioluminescence(GO:0008218) |
0.2 | 2.8 | GO:0046940 | nucleoside monophosphate phosphorylation(GO:0046940) |
0.9 | 2.7 | GO:0080033 | cellular response to nitrite(GO:0071250) response to nitrite(GO:0080033) glomerular visceral epithelial cell apoptotic process(GO:1903210) regulation of glomerular visceral epithelial cell apoptotic process(GO:1904633) positive regulation of glomerular visceral epithelial cell apoptotic process(GO:1904635) response to resveratrol(GO:1904638) cellular response to resveratrol(GO:1904639) positive regulation of progesterone biosynthetic process(GO:2000184) |
0.1 | 2.7 | GO:0055003 | cardiac myofibril assembly(GO:0055003) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 15.6 | GO:0030018 | Z disc(GO:0030018) |
0.0 | 5.9 | GO:0005788 | endoplasmic reticulum lumen(GO:0005788) |
0.1 | 4.7 | GO:0005719 | nuclear euchromatin(GO:0005719) |
0.0 | 4.6 | GO:0008076 | voltage-gated potassium channel complex(GO:0008076) |
1.1 | 4.3 | GO:0034685 | integrin alphav-beta6 complex(GO:0034685) |
0.9 | 2.7 | GO:1990843 | subsarcolemmal mitochondrion(GO:1990843) interfibrillar mitochondrion(GO:1990844) |
0.1 | 2.7 | GO:0070971 | endoplasmic reticulum exit site(GO:0070971) |
0.2 | 2.5 | GO:0000015 | phosphopyruvate hydratase complex(GO:0000015) |
0.0 | 2.5 | GO:0033116 | endoplasmic reticulum-Golgi intermediate compartment membrane(GO:0033116) |
0.0 | 2.2 | GO:0005882 | intermediate filament(GO:0005882) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 7.9 | GO:0008093 | cytoskeletal adaptor activity(GO:0008093) |
1.6 | 4.7 | GO:0004056 | argininosuccinate lyase activity(GO:0004056) |
0.8 | 4.7 | GO:1902122 | chenodeoxycholic acid binding(GO:1902122) |
0.2 | 4.6 | GO:0015467 | G-protein activated inward rectifier potassium channel activity(GO:0015467) |
0.0 | 3.6 | GO:0001618 | virus receptor activity(GO:0001618) |
0.1 | 2.9 | GO:0000400 | four-way junction DNA binding(GO:0000400) |
0.5 | 2.8 | GO:0046899 | nucleoside triphosphate adenylate kinase activity(GO:0046899) |
0.3 | 2.7 | GO:0004468 | lysine N-acetyltransferase activity, acting on acetyl phosphate as donor(GO:0004468) |
0.1 | 2.7 | GO:0042975 | peroxisome proliferator activated receptor binding(GO:0042975) |
0.1 | 2.7 | GO:0005523 | tropomyosin binding(GO:0005523) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.7 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
0.1 | 4.3 | PID INTEGRIN5 PATHWAY | Beta5 beta6 beta7 and beta8 integrin cell surface interactions |
0.1 | 4.3 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
0.0 | 2.0 | PID TRKR PATHWAY | Neurotrophic factor-mediated Trk receptor signaling |
0.0 | 1.7 | PID CASPASE PATHWAY | Caspase cascade in apoptosis |
0.0 | 1.6 | PID RHODOPSIN PATHWAY | Visual signal transduction: Rods |
0.0 | 1.2 | PID ECADHERIN NASCENT AJ PATHWAY | E-cadherin signaling in the nascent adherens junction |
0.0 | 0.8 | ST FAS SIGNALING PATHWAY | Fas Signaling Pathway |
0.0 | 0.6 | PID S1P META PATHWAY | Sphingosine 1-phosphate (S1P) pathway |
0.0 | 0.4 | PID ECADHERIN KERATINOCYTE PATHWAY | E-cadherin signaling in keratinocytes |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.2 | REACTOME GLUCONEOGENESIS | Genes involved in Gluconeogenesis |
0.0 | 4.7 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
0.1 | 4.6 | REACTOME INHIBITION OF VOLTAGE GATED CA2 CHANNELS VIA GBETA GAMMA SUBUNITS | Genes involved in Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits |
0.1 | 2.9 | REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA | Genes involved in Circadian Repression of Expression by REV-ERBA |
0.1 | 2.2 | REACTOME AMINE DERIVED HORMONES | Genes involved in Amine-derived hormones |
0.1 | 2.0 | REACTOME GLYCOGEN BREAKDOWN GLYCOGENOLYSIS | Genes involved in Glycogen breakdown (glycogenolysis) |
0.0 | 1.9 | REACTOME GABA A RECEPTOR ACTIVATION | Genes involved in GABA A receptor activation |
0.0 | 1.6 | REACTOME SYNTHESIS OF VERY LONG CHAIN FATTY ACYL COAS | Genes involved in Synthesis of very long-chain fatty acyl-CoAs |
0.0 | 1.6 | REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS | Genes involved in Caspase-mediated cleavage of cytoskeletal proteins |
0.0 | 1.5 | REACTOME PLATELET CALCIUM HOMEOSTASIS | Genes involved in Platelet calcium homeostasis |