Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
HOMEZ | hg38_v1_chr14_-_23286082_23286141 | 0.46 | 8.4e-03 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr4_+_158210479 Show fit | 5.38 |
ENST00000504569.5
ENST00000509278.5 ENST00000514558.5 ENST00000503200.5 ENST00000296529.11 |
transmembrane protein 144 |
|
chr9_-_92404690 Show fit | 4.65 |
ENST00000447356.1
|
osteoglycin |
|
chrX_-_93673558 Show fit | 4.25 |
ENST00000475430.2
ENST00000373079.4 |
nucleosome assembly protein 1 like 3 |
|
chr1_-_68050615 Show fit | 3.73 |
ENST00000646789.1
|
DIRAS family GTPase 3 |
|
chr6_+_30888730 Show fit | 3.51 |
ENST00000376575.7
ENST00000513240.5 |
discoidin domain receptor tyrosine kinase 1 |
|
chrX_+_105948429 Show fit | 3.04 |
ENST00000540278.1
|
Nik related kinase |
|
chr3_+_319683 Show fit | 2.86 |
ENST00000620033.4
|
cell adhesion molecule L1 like |
|
chr9_-_92404559 Show fit | 2.59 |
ENST00000262551.8
ENST00000375561.10 |
osteoglycin |
|
chr1_+_163069353 Show fit | 2.57 |
ENST00000531057.5
ENST00000527809.5 ENST00000367908.8 ENST00000367909.11 |
regulator of G protein signaling 4 |
|
chr2_+_11534039 Show fit | 2.53 |
ENST00000381486.7
|
growth regulating estrogen receptor binding 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 7.4 | GO:0034219 | carbohydrate transmembrane transport(GO:0034219) |
0.1 | 7.0 | GO:0006334 | nucleosome assembly(GO:0006334) |
0.3 | 6.4 | GO:0042340 | keratan sulfate catabolic process(GO:0042340) |
0.3 | 5.1 | GO:0061302 | smooth muscle cell-matrix adhesion(GO:0061302) |
0.4 | 4.3 | GO:0033088 | negative regulation of immature T cell proliferation in thymus(GO:0033088) |
0.1 | 4.1 | GO:0006349 | regulation of gene expression by genetic imprinting(GO:0006349) |
0.1 | 4.1 | GO:0045744 | negative regulation of G-protein coupled receptor protein signaling pathway(GO:0045744) |
0.8 | 3.9 | GO:0034334 | adherens junction maintenance(GO:0034334) |
0.1 | 3.9 | GO:0003334 | keratinocyte development(GO:0003334) |
0.1 | 3.8 | GO:0035735 | intraciliary transport involved in cilium morphogenesis(GO:0035735) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 8.8 | GO:0043235 | receptor complex(GO:0043235) |
0.1 | 8.2 | GO:0005796 | Golgi lumen(GO:0005796) |
0.0 | 7.3 | GO:0005578 | proteinaceous extracellular matrix(GO:0005578) |
0.1 | 4.0 | GO:0030686 | 90S preribosome(GO:0030686) |
0.0 | 3.9 | GO:0031463 | Cul3-RING ubiquitin ligase complex(GO:0031463) |
0.4 | 3.5 | GO:0005826 | actomyosin contractile ring(GO:0005826) |
0.4 | 3.3 | GO:0033503 | HULC complex(GO:0033503) |
0.0 | 3.3 | GO:0030018 | Z disc(GO:0030018) |
0.3 | 3.2 | GO:0005955 | calcineurin complex(GO:0005955) |
0.3 | 3.0 | GO:0000835 | ER ubiquitin ligase complex(GO:0000835) Hrd1p ubiquitin ligase complex(GO:0000836) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 9.8 | GO:0008083 | growth factor activity(GO:0008083) |
0.1 | 7.4 | GO:0015144 | carbohydrate transmembrane transporter activity(GO:0015144) carbohydrate transporter activity(GO:1901476) |
0.0 | 6.1 | GO:0003924 | GTPase activity(GO:0003924) |
0.3 | 5.1 | GO:0038062 | protein tyrosine kinase collagen receptor activity(GO:0038062) |
0.0 | 4.8 | GO:0005518 | collagen binding(GO:0005518) |
0.1 | 4.7 | GO:0001965 | G-protein alpha-subunit binding(GO:0001965) |
0.4 | 4.3 | GO:0001042 | RNA polymerase I core binding(GO:0001042) |
0.1 | 4.1 | GO:0050811 | GABA receptor binding(GO:0050811) |
0.1 | 3.9 | GO:0051371 | muscle alpha-actinin binding(GO:0051371) |
0.4 | 3.2 | GO:0005220 | inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity(GO:0005220) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 9.6 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.1 | 4.9 | ST GAQ PATHWAY | G alpha q Pathway |
0.0 | 4.7 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.1 | 4.3 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
0.0 | 3.5 | ST FAS SIGNALING PATHWAY | Fas Signaling Pathway |
0.0 | 2.8 | PID TNF PATHWAY | TNF receptor signaling pathway |
0.1 | 2.5 | PID HIF1A PATHWAY | Hypoxic and oxygen homeostasis regulation of HIF-1-alpha |
0.0 | 2.2 | PID ERA GENOMIC PATHWAY | Validated nuclear estrogen receptor alpha network |
0.1 | 1.9 | PID ANTHRAX PATHWAY | Cellular roles of Anthrax toxin |
0.0 | 1.6 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 15.3 | REACTOME GENERIC TRANSCRIPTION PATHWAY | Genes involved in Generic Transcription Pathway |
0.3 | 6.4 | REACTOME KERATAN SULFATE DEGRADATION | Genes involved in Keratan sulfate degradation |
0.1 | 5.3 | REACTOME DOWNREGULATION OF ERBB2 ERBB3 SIGNALING | Genes involved in Downregulation of ERBB2:ERBB3 signaling |
0.0 | 4.9 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.0 | 4.5 | REACTOME G ALPHA Z SIGNALLING EVENTS | Genes involved in G alpha (z) signalling events |
0.0 | 2.7 | REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES | Genes involved in Loss of Nlp from mitotic centrosomes |
0.1 | 2.6 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.0 | 2.5 | REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION | Genes involved in Transcriptional Regulation of White Adipocyte Differentiation |
0.1 | 2.2 | REACTOME THE NLRP3 INFLAMMASOME | Genes involved in The NLRP3 inflammasome |
0.1 | 2.1 | REACTOME SYNTHESIS OF PIPS AT THE LATE ENDOSOME MEMBRANE | Genes involved in Synthesis of PIPs at the late endosome membrane |