Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
HOXA1 | hg38_v1_chr7_-_27095972_27096039 | -0.09 | 6.1e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr22_+_41571995 Show fit | 7.06 |
ENST00000460790.1
|
cold shock domain containing C2 |
|
chr8_+_103140692 Show fit | 3.68 |
ENST00000438105.2
ENST00000309982.10 ENST00000297574.6 |
BAALC binder of MAP3K1 and KLF4 |
|
chr6_+_30894574 Show fit | 2.64 |
ENST00000514434.1
|
discoidin domain receptor tyrosine kinase 1 |
|
chr2_+_230864639 Show fit | 2.31 |
ENST00000457215.5
ENST00000541852.5 |
integral membrane protein 2C |
|
chr11_+_2461432 Show fit | 2.14 |
ENST00000335475.6
|
potassium voltage-gated channel subfamily Q member 1 |
|
chr8_-_27258386 Show fit | 1.73 |
ENST00000350889.8
ENST00000519997.5 ENST00000519614.5 ENST00000522908.1 ENST00000265770.11 |
stathmin 4 |
|
chr1_+_65264694 Show fit | 1.57 |
ENST00000263441.11
ENST00000395325.7 |
DnaJ heat shock protein family (Hsp40) member C6 |
|
chr7_-_137343688 Show fit | 1.52 |
ENST00000348225.7
|
pleiotrophin |
|
chrX_-_73214793 Show fit | 1.52 |
ENST00000373517.4
|
nucleosome assembly protein 1 like 2 |
|
chr8_-_90082871 Show fit | 1.50 |
ENST00000265431.7
|
calbindin 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 7.2 | GO:0043488 | regulation of mRNA stability(GO:0043488) |
0.0 | 3.4 | GO:0007019 | microtubule depolymerization(GO:0007019) |
0.2 | 3.1 | GO:0042985 | negative regulation of amyloid precursor protein biosynthetic process(GO:0042985) |
1.0 | 3.0 | GO:1904395 | positive regulation of skeletal muscle acetylcholine-gated channel clustering(GO:1904395) negative regulation of neuromuscular junction development(GO:1904397) |
0.1 | 2.6 | GO:0061302 | smooth muscle cell-matrix adhesion(GO:0061302) |
0.5 | 2.5 | GO:0035645 | enteric smooth muscle cell differentiation(GO:0035645) |
0.6 | 2.3 | GO:0018153 | isopeptide cross-linking via N6-(L-isoglutamyl)-L-lysine(GO:0018153) isopeptide cross-linking(GO:0018262) |
0.2 | 2.1 | GO:0060372 | regulation of atrial cardiac muscle cell membrane repolarization(GO:0060372) |
0.3 | 2.0 | GO:1902847 | regulation of neuronal signal transduction(GO:1902847) positive regulation of neurofibrillary tangle assembly(GO:1902998) |
0.1 | 2.0 | GO:0048680 | positive regulation of axon regeneration(GO:0048680) negative regulation of insulin secretion involved in cellular response to glucose stimulus(GO:0061179) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 8.1 | GO:0099572 | postsynaptic density(GO:0014069) postsynaptic specialization(GO:0099572) |
0.0 | 5.6 | GO:0008076 | voltage-gated potassium channel complex(GO:0008076) |
0.0 | 5.6 | GO:0030426 | growth cone(GO:0030426) |
0.0 | 4.1 | GO:0042734 | presynaptic membrane(GO:0042734) |
0.0 | 3.8 | GO:0005604 | basement membrane(GO:0005604) |
0.0 | 2.5 | GO:0005923 | bicellular tight junction(GO:0005923) |
0.0 | 2.4 | GO:0043195 | terminal bouton(GO:0043195) |
0.0 | 2.4 | GO:0005882 | intermediate filament(GO:0005882) |
0.0 | 2.3 | GO:0016459 | myosin complex(GO:0016459) |
0.1 | 2.0 | GO:0097418 | neurofibrillary tangle(GO:0097418) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 7.1 | GO:0003730 | mRNA 3'-UTR binding(GO:0003730) |
0.2 | 4.4 | GO:0038062 | protein tyrosine kinase collagen receptor activity(GO:0038062) |
0.0 | 4.4 | GO:0005200 | structural constituent of cytoskeleton(GO:0005200) |
0.8 | 3.0 | GO:0035373 | chondroitin sulfate proteoglycan binding(GO:0035373) |
0.2 | 2.7 | GO:0003810 | protein-glutamine gamma-glutamyltransferase activity(GO:0003810) |
0.0 | 2.5 | GO:0004864 | protein phosphatase inhibitor activity(GO:0004864) |
0.0 | 2.3 | GO:0001540 | beta-amyloid binding(GO:0001540) |
0.3 | 2.1 | GO:0086089 | voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization(GO:0086089) |
0.3 | 2.1 | GO:0004962 | endothelin receptor activity(GO:0004962) |
0.3 | 2.0 | GO:0005219 | ryanodine-sensitive calcium-release channel activity(GO:0005219) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.1 | PID SYNDECAN 3 PATHWAY | Syndecan-3-mediated signaling events |
0.0 | 3.0 | PID ARF6 TRAFFICKING PATHWAY | Arf6 trafficking events |
0.0 | 2.3 | PID INTEGRIN A9B1 PATHWAY | Alpha9 beta1 integrin signaling events |
0.0 | 2.0 | PID MYC REPRESS PATHWAY | Validated targets of C-MYC transcriptional repression |
0.0 | 1.8 | PID FRA PATHWAY | Validated transcriptional targets of AP1 family members Fra1 and Fra2 |
0.0 | 1.5 | PID RAC1 REG PATHWAY | Regulation of RAC1 activity |
0.0 | 1.4 | PID RAS PATHWAY | Regulation of Ras family activation |
0.0 | 1.2 | PID ILK PATHWAY | Integrin-linked kinase signaling |
0.0 | 1.1 | ST WNT CA2 CYCLIC GMP PATHWAY | Wnt/Ca2+/cyclic GMP signaling. |
0.0 | 0.7 | PID TCR RAS PATHWAY | Ras signaling in the CD4+ TCR pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.5 | REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 | Genes involved in Response to elevated platelet cytosolic Ca2+ |
0.0 | 2.0 | REACTOME CGMP EFFECTS | Genes involved in cGMP effects |
0.0 | 1.7 | REACTOME TRAFFICKING OF GLUR2 CONTAINING AMPA RECEPTORS | Genes involved in Trafficking of GluR2-containing AMPA receptors |
0.0 | 1.7 | REACTOME A TETRASACCHARIDE LINKER SEQUENCE IS REQUIRED FOR GAG SYNTHESIS | Genes involved in A tetrasaccharide linker sequence is required for GAG synthesis |
0.0 | 1.7 | REACTOME LYSOSOME VESICLE BIOGENESIS | Genes involved in Lysosome Vesicle Biogenesis |
0.0 | 1.6 | REACTOME VOLTAGE GATED POTASSIUM CHANNELS | Genes involved in Voltage gated Potassium channels |
0.0 | 1.2 | REACTOME NEPHRIN INTERACTIONS | Genes involved in Nephrin interactions |
0.0 | 1.1 | REACTOME NA CL DEPENDENT NEUROTRANSMITTER TRANSPORTERS | Genes involved in Na+/Cl- dependent neurotransmitter transporters |
0.0 | 1.1 | REACTOME NUCLEAR SIGNALING BY ERBB4 | Genes involved in Nuclear signaling by ERBB4 |
0.0 | 0.9 | REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE | Genes involved in Reversible Hydration of Carbon Dioxide |