Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
HOXA13 | hg38_v1_chr7_-_27200083_27200096 | 0.42 | 1.7e-02 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.3 | 11.6 | GO:0060414 | aorta smooth muscle tissue morphogenesis(GO:0060414) |
0.0 | 7.4 | GO:0010811 | positive regulation of cell-substrate adhesion(GO:0010811) |
1.8 | 7.2 | GO:2000097 | regulation of smooth muscle cell-matrix adhesion(GO:2000097) |
0.5 | 6.3 | GO:0048251 | elastic fiber assembly(GO:0048251) |
1.5 | 6.0 | GO:0010652 | regulation of cell communication by chemical coupling(GO:0010645) positive regulation of cell communication by chemical coupling(GO:0010652) |
0.1 | 5.9 | GO:0070207 | protein homotrimerization(GO:0070207) |
0.1 | 5.3 | GO:0045026 | plasma membrane fusion(GO:0045026) |
1.7 | 5.0 | GO:1990764 | regulation of myofibroblast contraction(GO:1904328) myofibroblast contraction(GO:1990764) |
0.1 | 4.4 | GO:0030214 | hyaluronan catabolic process(GO:0030214) |
0.1 | 4.2 | GO:0006730 | one-carbon metabolic process(GO:0006730) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 10.2 | GO:0005614 | interstitial matrix(GO:0005614) |
0.1 | 7.9 | GO:0097517 | stress fiber(GO:0001725) contractile actin filament bundle(GO:0097517) |
0.4 | 7.5 | GO:0005583 | fibrillar collagen trimer(GO:0005583) banded collagen fibril(GO:0098643) |
0.0 | 6.8 | GO:0022626 | cytosolic ribosome(GO:0022626) |
0.6 | 6.3 | GO:0071953 | elastic fiber(GO:0071953) |
0.2 | 6.0 | GO:0005922 | connexon complex(GO:0005922) |
0.4 | 5.0 | GO:0097197 | tetraspanin-enriched microdomain(GO:0097197) |
0.1 | 4.8 | GO:0031092 | platelet alpha granule membrane(GO:0031092) |
0.0 | 4.1 | GO:0031225 | anchored component of membrane(GO:0031225) |
0.0 | 2.8 | GO:0046658 | anchored component of plasma membrane(GO:0046658) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 14.5 | GO:0005518 | collagen binding(GO:0005518) |
0.1 | 9.6 | GO:0005044 | scavenger receptor activity(GO:0005044) |
0.3 | 6.7 | GO:0048407 | platelet-derived growth factor binding(GO:0048407) |
0.0 | 6.6 | GO:0005178 | integrin binding(GO:0005178) |
0.1 | 6.2 | GO:0015485 | cholesterol binding(GO:0015485) |
0.7 | 6.0 | GO:0086075 | gap junction channel activity involved in cardiac conduction electrical coupling(GO:0086075) |
0.0 | 5.6 | GO:0004714 | transmembrane receptor protein tyrosine kinase activity(GO:0004714) |
0.3 | 5.0 | GO:0008517 | folic acid transporter activity(GO:0008517) |
0.5 | 4.9 | GO:0004687 | myosin light chain kinase activity(GO:0004687) |
0.4 | 4.0 | GO:0004064 | arylesterase activity(GO:0004064) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 19.7 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.1 | 8.5 | NABA COLLAGENS | Genes encoding collagen proteins |
0.1 | 7.8 | PID FRA PATHWAY | Validated transcriptional targets of AP1 family members Fra1 and Fra2 |
0.1 | 5.0 | PID AURORA B PATHWAY | Aurora B signaling |
0.1 | 4.0 | PID FOXM1 PATHWAY | FOXM1 transcription factor network |
0.0 | 3.5 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.0 | 2.7 | PID BETA CATENIN NUC PATHWAY | Regulation of nuclear beta catenin signaling and target gene transcription |
0.1 | 2.4 | PID THROMBIN PAR4 PATHWAY | PAR4-mediated thrombin signaling events |
0.0 | 2.4 | PID TAP63 PATHWAY | Validated transcriptional targets of TAp63 isoforms |
0.1 | 1.8 | SA G2 AND M PHASES | Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 8.5 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.2 | 6.0 | REACTOME GAP JUNCTION ASSEMBLY | Genes involved in Gap junction assembly |
0.1 | 4.8 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.2 | 4.4 | REACTOME HYALURONAN UPTAKE AND DEGRADATION | Genes involved in Hyaluronan uptake and degradation |
0.2 | 4.0 | REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE | Genes involved in Reversible Hydration of Carbon Dioxide |
0.0 | 3.9 | REACTOME PEPTIDE LIGAND BINDING RECEPTORS | Genes involved in Peptide ligand-binding receptors |
0.0 | 2.9 | REACTOME ANTIGEN PROCESSING CROSS PRESENTATION | Genes involved in Antigen processing-Cross presentation |
0.1 | 2.2 | REACTOME INITIAL TRIGGERING OF COMPLEMENT | Genes involved in Initial triggering of complement |
0.1 | 2.1 | REACTOME SIGNALING BY HIPPO | Genes involved in Signaling by Hippo |
0.1 | 2.0 | REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS | Genes involved in Bile salt and organic anion SLC transporters |