Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
HOXA4 | hg38_v1_chr7_-_27130182_27130226 | -0.31 | 8.6e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr10_-_90921079 Show fit | 12.46 |
ENST00000371697.4
|
ankyrin repeat domain 1 |
|
chr3_+_121593363 Show fit | 12.18 |
ENST00000338040.6
|
F-box protein 40 |
|
chr3_-_52452828 Show fit | 8.91 |
ENST00000496590.1
|
troponin C1, slow skeletal and cardiac type |
|
chr1_+_160190567 Show fit | 8.82 |
ENST00000368078.8
|
calsequestrin 1 |
|
chr22_+_25742141 Show fit | 8.55 |
ENST00000536101.5
ENST00000335473.12 ENST00000407587.6 |
myosin XVIIIB |
|
chr17_-_10518536 Show fit | 8.53 |
ENST00000226207.6
|
myosin heavy chain 1 |
|
chr2_-_178804623 Show fit | 8.40 |
ENST00000359218.10
ENST00000342175.11 |
titin |
|
chr10_-_73655984 Show fit | 8.29 |
ENST00000394810.3
|
synaptopodin 2 like |
|
chr3_-_42702778 Show fit | 7.76 |
ENST00000457462.5
ENST00000441594.6 |
hedgehog acyltransferase like |
|
chr8_+_78591222 Show fit | 7.36 |
ENST00000518467.1
|
cAMP-dependent protein kinase inhibitor alpha |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.0 | 18.9 | GO:0001778 | plasma membrane repair(GO:0001778) |
3.1 | 12.5 | GO:0060262 | regulation of N-terminal protein palmitoylation(GO:0060254) negative regulation of N-terminal protein palmitoylation(GO:0060262) negative regulation of protein lipidation(GO:1903060) |
0.4 | 12.5 | GO:0043517 | positive regulation of DNA damage response, signal transduction by p53 class mediator(GO:0043517) |
2.0 | 10.2 | GO:0090290 | positive regulation of osteoclast proliferation(GO:0090290) |
0.0 | 9.6 | GO:0000209 | protein polyubiquitination(GO:0000209) |
0.0 | 9.2 | GO:0006936 | muscle contraction(GO:0006936) |
3.0 | 9.0 | GO:0016121 | tetraterpenoid metabolic process(GO:0016108) carotenoid metabolic process(GO:0016116) carotene catabolic process(GO:0016121) xanthophyll metabolic process(GO:0016122) terpene catabolic process(GO:0046247) |
2.2 | 8.9 | GO:0032972 | diaphragm contraction(GO:0002086) regulation of muscle filament sliding speed(GO:0032972) |
0.6 | 8.8 | GO:0014809 | regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion(GO:0014809) |
0.1 | 8.6 | GO:0000381 | regulation of alternative mRNA splicing, via spliceosome(GO:0000381) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 31.6 | GO:0031674 | I band(GO:0031674) |
1.9 | 18.9 | GO:0005826 | actomyosin contractile ring(GO:0005826) |
0.4 | 18.5 | GO:0005859 | muscle myosin complex(GO:0005859) |
0.0 | 9.8 | GO:0005759 | mitochondrial matrix(GO:0005759) |
1.5 | 8.9 | GO:1990584 | cardiac Troponin complex(GO:1990584) |
1.5 | 8.8 | GO:0014802 | terminal cisterna(GO:0014802) |
0.4 | 8.5 | GO:0016461 | unconventional myosin complex(GO:0016461) |
0.1 | 8.5 | GO:0005834 | heterotrimeric G-protein complex(GO:0005834) |
0.0 | 5.5 | GO:0005802 | trans-Golgi network(GO:0005802) |
0.0 | 3.6 | GO:0043195 | terminal bouton(GO:0043195) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 20.5 | GO:0000146 | microfilament motor activity(GO:0000146) |
0.3 | 18.5 | GO:0051428 | peptide hormone receptor binding(GO:0051428) |
0.1 | 18.0 | GO:0003774 | motor activity(GO:0003774) |
0.0 | 15.7 | GO:0061630 | ubiquitin protein ligase activity(GO:0061630) |
4.2 | 12.5 | GO:0061629 | RNA polymerase II sequence-specific DNA binding transcription factor binding(GO:0061629) |
0.6 | 11.1 | GO:0031433 | telethonin binding(GO:0031433) |
0.2 | 9.0 | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen(GO:0016702) |
0.9 | 8.9 | GO:0031013 | troponin I binding(GO:0031013) |
0.2 | 7.4 | GO:0004862 | cAMP-dependent protein kinase inhibitor activity(GO:0004862) |
0.7 | 6.6 | GO:0003873 | 6-phosphofructo-2-kinase activity(GO:0003873) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 18.9 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.1 | 3.6 | PID P38 MK2 PATHWAY | p38 signaling mediated by MAPKAP kinases |
0.0 | 3.6 | PID AJDISS 2PATHWAY | Posttranslational regulation of adherens junction stability and dissassembly |
0.0 | 3.1 | PID RET PATHWAY | Signaling events regulated by Ret tyrosine kinase |
0.1 | 1.7 | PID CIRCADIAN PATHWAY | Circadian rhythm pathway |
0.0 | 1.6 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.0 | 1.4 | PID CASPASE PATHWAY | Caspase cascade in apoptosis |
0.0 | 1.2 | PID TRAIL PATHWAY | TRAIL signaling pathway |
0.0 | 1.2 | PID P53 REGULATION PATHWAY | p53 pathway |
0.0 | 1.1 | PID A6B1 A6B4 INTEGRIN PATHWAY | a6b1 and a6b4 Integrin signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 13.4 | REACTOME PPARA ACTIVATES GENE EXPRESSION | Genes involved in PPARA Activates Gene Expression |
0.1 | 10.0 | REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS | Genes involved in Class B/2 (Secretin family receptors) |
0.0 | 10.0 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
0.1 | 9.3 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.2 | 8.1 | REACTOME PROSTACYCLIN SIGNALLING THROUGH PROSTACYCLIN RECEPTOR | Genes involved in Prostacyclin signalling through prostacyclin receptor |
0.1 | 6.6 | REACTOME GLYCOLYSIS | Genes involved in Glycolysis |
0.2 | 6.2 | REACTOME N GLYCAN ANTENNAE ELONGATION | Genes involved in N-Glycan antennae elongation |
0.0 | 5.1 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.0 | 4.1 | REACTOME NGF SIGNALLING VIA TRKA FROM THE PLASMA MEMBRANE | Genes involved in NGF signalling via TRKA from the plasma membrane |
0.0 | 3.5 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |