Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
LHX9 | hg38_v1_chr1_+_197912462_197912505 | 0.31 | 8.5e-02 | Click! |
HOXB4 | hg38_v1_chr17_-_48578341_48578356 | -0.22 | 2.2e-01 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 12.4 | GO:0006936 | muscle contraction(GO:0006936) |
0.1 | 8.8 | GO:0032233 | positive regulation of actin filament bundle assembly(GO:0032233) |
0.2 | 5.3 | GO:0003334 | keratinocyte development(GO:0003334) |
0.4 | 4.6 | GO:2001288 | positive regulation of caveolin-mediated endocytosis(GO:2001288) |
0.1 | 4.3 | GO:0009214 | cyclic nucleotide catabolic process(GO:0009214) |
0.2 | 4.0 | GO:0071688 | striated muscle myosin thick filament assembly(GO:0071688) |
0.1 | 3.9 | GO:2000311 | regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity(GO:2000311) |
0.4 | 3.7 | GO:1904879 | positive regulation of calcium ion transmembrane transport via high voltage-gated calcium channel(GO:1904879) |
0.4 | 3.5 | GO:0090063 | positive regulation of microtubule nucleation(GO:0090063) |
0.0 | 3.1 | GO:0007156 | homophilic cell adhesion via plasma membrane adhesion molecules(GO:0007156) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 9.1 | GO:0016010 | dystrophin-associated glycoprotein complex(GO:0016010) glycoprotein complex(GO:0090665) |
0.1 | 7.3 | GO:0097517 | stress fiber(GO:0001725) contractile actin filament bundle(GO:0097517) |
0.0 | 7.0 | GO:0031901 | early endosome membrane(GO:0031901) |
0.1 | 5.3 | GO:0002102 | podosome(GO:0002102) |
0.1 | 5.0 | GO:0005771 | multivesicular body(GO:0005771) |
0.6 | 3.9 | GO:0005927 | muscle tendon junction(GO:0005927) |
0.0 | 3.8 | GO:0044309 | dendritic spine(GO:0043197) neuron spine(GO:0044309) |
0.1 | 3.7 | GO:1990454 | L-type voltage-gated calcium channel complex(GO:1990454) |
0.1 | 3.6 | GO:0032281 | AMPA glutamate receptor complex(GO:0032281) |
0.2 | 3.5 | GO:0005869 | dynactin complex(GO:0005869) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 15.7 | GO:0051371 | muscle alpha-actinin binding(GO:0051371) |
0.2 | 4.6 | GO:0019870 | potassium channel inhibitor activity(GO:0019870) |
0.0 | 4.6 | GO:0004722 | protein serine/threonine phosphatase activity(GO:0004722) |
0.1 | 3.8 | GO:0005245 | voltage-gated calcium channel activity(GO:0005245) |
0.9 | 3.7 | GO:0004113 | 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity(GO:0004113) |
0.2 | 3.7 | GO:0086056 | voltage-gated calcium channel activity involved in AV node cell action potential(GO:0086056) |
0.1 | 3.5 | GO:0070840 | dynein complex binding(GO:0070840) |
0.2 | 3.0 | GO:0004865 | protein serine/threonine phosphatase inhibitor activity(GO:0004865) |
0.0 | 3.0 | GO:0005200 | structural constituent of cytoskeleton(GO:0005200) |
0.1 | 2.8 | GO:0005247 | voltage-gated chloride channel activity(GO:0005247) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 7.6 | PID TGFBR PATHWAY | TGF-beta receptor signaling |
0.0 | 3.5 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
0.0 | 2.0 | PID CDC42 REG PATHWAY | Regulation of CDC42 activity |
0.0 | 1.9 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.1 | 1.7 | PID INTEGRIN4 PATHWAY | Alpha6 beta4 integrin-ligand interactions |
0.0 | 1.5 | PID INTEGRIN A4B1 PATHWAY | Alpha4 beta1 integrin signaling events |
0.0 | 1.4 | PID INSULIN GLUCOSE PATHWAY | Insulin-mediated glucose transport |
0.0 | 1.3 | PID ANTHRAX PATHWAY | Cellular roles of Anthrax toxin |
0.0 | 1.3 | PID MYC PATHWAY | C-MYC pathway |
0.0 | 1.2 | PID ERBB1 INTERNALIZATION PATHWAY | Internalization of ErbB1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.5 | REACTOME TRAFFICKING OF AMPA RECEPTORS | Genes involved in Trafficking of AMPA receptors |
0.0 | 3.8 | REACTOME VOLTAGE GATED POTASSIUM CHANNELS | Genes involved in Voltage gated Potassium channels |
0.1 | 3.7 | REACTOME INHIBITION OF INSULIN SECRETION BY ADRENALINE NORADRENALINE | Genes involved in Inhibition of Insulin Secretion by Adrenaline/Noradrenaline |
0.0 | 3.5 | REACTOME ACTIVATION OF CHAPERONE GENES BY XBP1S | Genes involved in Activation of Chaperone Genes by XBP1(S) |
0.0 | 3.0 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.0 | 2.6 | REACTOME NUCLEAR SIGNALING BY ERBB4 | Genes involved in Nuclear signaling by ERBB4 |
0.1 | 2.2 | REACTOME PKA MEDIATED PHOSPHORYLATION OF CREB | Genes involved in PKA-mediated phosphorylation of CREB |
0.1 | 2.1 | REACTOME PLATELET CALCIUM HOMEOSTASIS | Genes involved in Platelet calcium homeostasis |
0.0 | 2.1 | REACTOME AMINO ACID AND OLIGOPEPTIDE SLC TRANSPORTERS | Genes involved in Amino acid and oligopeptide SLC transporters |
0.1 | 2.0 | REACTOME INHIBITION OF REPLICATION INITIATION OF DAMAGED DNA BY RB1 E2F1 | Genes involved in Inhibition of replication initiation of damaged DNA by RB1/E2F1 |