Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
HOXB8 | hg38_v1_chr17_-_48613468_48613522 | -0.04 | 8.2e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_-_106593319 Show fit | 4.01 |
ENST00000390627.3
|
immunoglobulin heavy variable 3-53 |
|
chr4_-_70666961 Show fit | 3.62 |
ENST00000510437.5
|
joining chain of multimeric IgA and IgM |
|
chr4_-_70666492 Show fit | 3.55 |
ENST00000254801.9
ENST00000391614.7 |
joining chain of multimeric IgA and IgM |
|
chr2_+_90004792 Show fit | 3.10 |
ENST00000462693.1
|
immunoglobulin kappa variable 2D-24 (non-functional) |
|
chr22_+_22711689 Show fit | 3.02 |
ENST00000390308.2
|
immunoglobulin lambda variable 3-21 |
|
chr14_-_105987068 Show fit | 2.89 |
ENST00000390594.3
|
immunoglobulin heavy variable 1-2 |
|
chr14_-_106038355 Show fit | 2.82 |
ENST00000390597.3
|
immunoglobulin heavy variable 2-5 |
|
chr14_-_106360320 Show fit | 2.81 |
ENST00000390615.2
|
immunoglobulin heavy variable 3-33 |
|
chr22_+_22822658 Show fit | 2.73 |
ENST00000620395.2
|
immunoglobulin lambda variable 2-8 |
|
chr2_-_89010515 Show fit | 2.63 |
ENST00000493819.1
|
immunoglobulin kappa variable 1-9 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 50.2 | GO:0006958 | complement activation, classical pathway(GO:0006958) |
0.1 | 20.0 | GO:0002377 | immunoglobulin production(GO:0002377) |
0.8 | 8.8 | GO:0060267 | positive regulation of respiratory burst(GO:0060267) |
0.0 | 4.8 | GO:0002250 | adaptive immune response(GO:0002250) |
0.2 | 4.2 | GO:1900747 | negative regulation of vascular endothelial growth factor signaling pathway(GO:1900747) |
0.9 | 3.7 | GO:0021569 | rhombomere 3 development(GO:0021569) |
0.7 | 3.7 | GO:2000471 | regulation of hematopoietic stem cell migration(GO:2000471) positive regulation of hematopoietic stem cell migration(GO:2000473) |
0.8 | 3.2 | GO:0044147 | multi-organism catabolic process(GO:0044035) development of symbiont involved in interaction with host(GO:0044115) modulation of development of symbiont involved in interaction with host(GO:0044145) negative regulation of development of symbiont involved in interaction with host(GO:0044147) metabolism of substance in other organism involved in symbiotic interaction(GO:0052214) catabolism of substance in other organism involved in symbiotic interaction(GO:0052227) metabolism of macromolecule in other organism involved in symbiotic interaction(GO:0052229) catabolism by host of symbiont macromolecule(GO:0052360) catabolism by organism of macromolecule in other organism involved in symbiotic interaction(GO:0052361) catabolism by host of symbiont protein(GO:0052362) catabolism by organism of protein in other organism involved in symbiotic interaction(GO:0052363) catabolism by host of substance in symbiont(GO:0052364) metabolism by host of symbiont macromolecule(GO:0052416) metabolism by host of symbiont protein(GO:0052417) metabolism by organism of protein in other organism involved in symbiotic interaction(GO:0052418) metabolism by host of substance in symbiont(GO:0052419) |
0.2 | 2.8 | GO:0002227 | innate immune response in mucosa(GO:0002227) |
0.1 | 2.8 | GO:0019371 | cyclooxygenase pathway(GO:0019371) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 27.1 | GO:0005615 | extracellular space(GO:0005615) |
0.3 | 16.1 | GO:0042571 | immunoglobulin complex, circulating(GO:0042571) |
0.0 | 10.7 | GO:0005578 | proteinaceous extracellular matrix(GO:0005578) |
2.3 | 9.1 | GO:0071757 | hexameric IgM immunoglobulin complex(GO:0071757) |
0.0 | 5.5 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.0 | 5.1 | GO:0072562 | blood microparticle(GO:0072562) |
0.0 | 4.8 | GO:0031225 | anchored component of membrane(GO:0031225) |
0.0 | 4.4 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
0.3 | 4.2 | GO:0098647 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
0.0 | 3.6 | GO:0005796 | Golgi lumen(GO:0005796) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 69.8 | GO:0003823 | antigen binding(GO:0003823) |
0.1 | 10.5 | GO:0005518 | collagen binding(GO:0005518) |
1.1 | 7.9 | GO:0019862 | IgA binding(GO:0019862) |
0.0 | 4.2 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
0.1 | 3.6 | GO:0005001 | transmembrane receptor protein tyrosine phosphatase activity(GO:0005001) transmembrane receptor protein phosphatase activity(GO:0019198) |
0.0 | 3.3 | GO:0001078 | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078) |
0.4 | 3.2 | GO:0019834 | phospholipase A2 inhibitor activity(GO:0019834) |
0.6 | 2.8 | GO:0004666 | prostaglandin-endoperoxide synthase activity(GO:0004666) |
0.1 | 2.6 | GO:0005104 | fibroblast growth factor receptor binding(GO:0005104) |
0.1 | 2.6 | GO:0097153 | cysteine-type endopeptidase activity involved in apoptotic process(GO:0097153) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 10.4 | NABA SECRETED FACTORS | Genes encoding secreted soluble factors |
0.1 | 7.8 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 7.0 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 4.8 | SIG PIP3 SIGNALING IN B LYMPHOCYTES | Genes related to PIP3 signaling in B lymphocytes |
0.0 | 4.8 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.0 | 4.5 | NABA CORE MATRISOME | Ensemble of genes encoding core extracellular matrix including ECM glycoproteins, collagens and proteoglycans |
0.0 | 3.2 | PID SYNDECAN 2 PATHWAY | Syndecan-2-mediated signaling events |
0.0 | 2.6 | PID CD40 PATHWAY | CD40/CD40L signaling |
0.0 | 2.3 | PID CASPASE PATHWAY | Caspase cascade in apoptosis |
0.0 | 1.9 | PID IL12 2PATHWAY | IL12-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 7.3 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |
0.2 | 4.2 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.1 | 3.8 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.1 | 3.7 | REACTOME PHOSPHORYLATION OF CD3 AND TCR ZETA CHAINS | Genes involved in Phosphorylation of CD3 and TCR zeta chains |
0.0 | 3.7 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
0.0 | 3.3 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.2 | 2.9 | REACTOME KERATAN SULFATE DEGRADATION | Genes involved in Keratan sulfate degradation |
0.1 | 2.8 | REACTOME IL 7 SIGNALING | Genes involved in Interleukin-7 signaling |
0.0 | 2.8 | REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS | Genes involved in Class B/2 (Secretin family receptors) |
0.1 | 2.4 | REACTOME INTRINSIC PATHWAY | Genes involved in Intrinsic Pathway |