Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
HOXA11 | hg38_v1_chr7_-_27185223_27185249 | 0.38 | 3.4e-02 | Click! |
HOXD11 | hg38_v1_chr2_+_176107272_176107297 | 0.18 | 3.2e-01 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 9.8 | GO:0050911 | detection of chemical stimulus involved in sensory perception of smell(GO:0050911) |
1.1 | 9.0 | GO:0002074 | extraocular skeletal muscle development(GO:0002074) |
0.1 | 8.0 | GO:0030032 | lamellipodium assembly(GO:0030032) |
0.1 | 7.3 | GO:0006120 | mitochondrial electron transport, NADH to ubiquinone(GO:0006120) |
0.4 | 5.7 | GO:0014809 | regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion(GO:0014809) |
0.4 | 5.3 | GO:0045329 | carnitine biosynthetic process(GO:0045329) |
0.3 | 4.6 | GO:0000338 | protein deneddylation(GO:0000338) |
0.0 | 4.2 | GO:0043268 | positive regulation of potassium ion transport(GO:0043268) |
0.3 | 4.1 | GO:2000334 | response to linoleic acid(GO:0070543) blood microparticle formation(GO:0072564) regulation of blood microparticle formation(GO:2000332) positive regulation of blood microparticle formation(GO:2000334) |
0.4 | 3.8 | GO:0061624 | fructose catabolic process(GO:0006001) fructose catabolic process to hydroxyacetone phosphate and glyceraldehyde-3-phosphate(GO:0061624) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 15.9 | GO:0030018 | Z disc(GO:0030018) |
0.3 | 8.1 | GO:0032982 | myosin filament(GO:0032982) |
0.3 | 5.7 | GO:0016013 | syntrophin complex(GO:0016013) |
0.0 | 5.6 | GO:0005759 | mitochondrial matrix(GO:0005759) |
0.9 | 4.6 | GO:0045272 | plasma membrane respiratory chain complex I(GO:0045272) |
0.0 | 4.1 | GO:0070469 | respiratory chain(GO:0070469) |
1.0 | 4.0 | GO:0005863 | striated muscle myosin thick filament(GO:0005863) |
0.1 | 3.8 | GO:0034451 | centriolar satellite(GO:0034451) |
0.0 | 3.8 | GO:0030016 | myofibril(GO:0030016) |
0.0 | 3.6 | GO:0008076 | voltage-gated potassium channel complex(GO:0008076) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 16.7 | GO:0051371 | muscle alpha-actinin binding(GO:0051371) |
0.0 | 7.8 | GO:0003779 | actin binding(GO:0003779) |
0.0 | 7.2 | GO:0004984 | olfactory receptor activity(GO:0004984) |
0.2 | 5.7 | GO:0050998 | nitric-oxide synthase binding(GO:0050998) |
0.1 | 5.5 | GO:0042805 | actinin binding(GO:0042805) |
0.1 | 4.6 | GO:0051537 | 2 iron, 2 sulfur cluster binding(GO:0051537) |
0.0 | 4.4 | GO:0001227 | transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227) |
1.1 | 4.3 | GO:0008336 | gamma-butyrobetaine dioxygenase activity(GO:0008336) |
0.3 | 4.1 | GO:0070892 | lipoteichoic acid receptor activity(GO:0070892) |
0.1 | 3.9 | GO:0001972 | retinoic acid binding(GO:0001972) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.0 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.0 | 3.5 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.0 | 2.9 | PID MYC REPRESS PATHWAY | Validated targets of C-MYC transcriptional repression |
0.0 | 2.8 | PID TRKR PATHWAY | Neurotrophic factor-mediated Trk receptor signaling |
0.0 | 2.4 | PID P38 MKK3 6PATHWAY | p38 MAPK signaling pathway |
0.0 | 2.3 | ST MYOCYTE AD PATHWAY | Myocyte Adrenergic Pathway is a specific case of the generalized Adrenergic Pathway. |
0.0 | 2.2 | PID IL6 7 PATHWAY | IL6-mediated signaling events |
0.0 | 1.9 | SA B CELL RECEPTOR COMPLEXES | Antigen binding to B cell receptors activates protein tyrosine kinases, such as the Src family, which ultimate activate MAP kinases. |
0.0 | 1.8 | PID MAPK TRK PATHWAY | Trk receptor signaling mediated by the MAPK pathway |
0.0 | 1.8 | PID CDC42 PATHWAY | CDC42 signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 12.9 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.0 | 9.9 | REACTOME PPARA ACTIVATES GENE EXPRESSION | Genes involved in PPARA Activates Gene Expression |
0.0 | 7.2 | REACTOME OLFACTORY SIGNALING PATHWAY | Genes involved in Olfactory Signaling Pathway |
0.1 | 6.7 | REACTOME DCC MEDIATED ATTRACTIVE SIGNALING | Genes involved in DCC mediated attractive signaling |
0.1 | 6.1 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
0.1 | 4.9 | REACTOME GLYCOLYSIS | Genes involved in Glycolysis |
0.2 | 4.6 | REACTOME GLUCURONIDATION | Genes involved in Glucuronidation |
0.1 | 4.0 | REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE | Genes involved in Amino acid transport across the plasma membrane |
0.2 | 3.5 | REACTOME ETHANOL OXIDATION | Genes involved in Ethanol oxidation |
0.0 | 3.5 | REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS | Genes involved in Class B/2 (Secretin family receptors) |