Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
IKZF1 | hg38_v1_chr7_+_50304038_50304121 | -0.33 | 6.7e-02 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 137.8 | GO:0006958 | complement activation, classical pathway(GO:0006958) |
0.2 | 31.8 | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane(GO:0006614) |
0.1 | 24.5 | GO:0002377 | immunoglobulin production(GO:0002377) |
1.5 | 19.5 | GO:0048251 | elastic fiber assembly(GO:0048251) |
0.5 | 12.1 | GO:1904706 | negative regulation of vascular smooth muscle cell proliferation(GO:1904706) |
0.2 | 11.8 | GO:0035987 | endodermal cell differentiation(GO:0035987) |
2.6 | 10.5 | GO:0010900 | negative regulation of phosphatidylcholine catabolic process(GO:0010900) |
0.0 | 10.1 | GO:0007517 | muscle organ development(GO:0007517) |
0.5 | 9.8 | GO:1900747 | negative regulation of vascular endothelial growth factor signaling pathway(GO:1900747) |
0.8 | 9.1 | GO:0090500 | endocardial cushion to mesenchymal transition(GO:0090500) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 77.0 | GO:0072562 | blood microparticle(GO:0072562) |
0.1 | 74.8 | GO:0005615 | extracellular space(GO:0005615) |
0.1 | 49.6 | GO:0031012 | extracellular matrix(GO:0031012) |
0.1 | 37.7 | GO:0005925 | focal adhesion(GO:0005925) |
0.1 | 34.3 | GO:0005788 | endoplasmic reticulum lumen(GO:0005788) |
0.7 | 34.0 | GO:0042571 | immunoglobulin complex, circulating(GO:0042571) |
0.3 | 28.6 | GO:0005581 | collagen trimer(GO:0005581) |
0.2 | 27.9 | GO:0005604 | basement membrane(GO:0005604) |
0.2 | 21.1 | GO:0001725 | stress fiber(GO:0001725) contractile actin filament bundle(GO:0097517) |
0.1 | 19.3 | GO:0005913 | cell-cell adherens junction(GO:0005913) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 82.7 | GO:0003823 | antigen binding(GO:0003823) |
0.2 | 57.1 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.5 | 36.4 | GO:0034987 | immunoglobulin receptor binding(GO:0034987) |
0.3 | 32.4 | GO:0005201 | extracellular matrix structural constituent(GO:0005201) |
0.2 | 31.4 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.1 | 27.3 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
0.1 | 18.3 | GO:0008307 | structural constituent of muscle(GO:0008307) |
0.1 | 18.2 | GO:0005518 | collagen binding(GO:0005518) |
0.0 | 16.4 | GO:0001077 | transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001077) |
1.1 | 12.4 | GO:0060228 | phosphatidylcholine-sterol O-acyltransferase activator activity(GO:0060228) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 95.1 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.2 | 62.4 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.1 | 46.3 | NABA SECRETED FACTORS | Genes encoding secreted soluble factors |
0.4 | 31.2 | NABA BASEMENT MEMBRANES | Genes encoding structural components of basement membranes |
0.1 | 30.2 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.3 | 22.5 | PID INTEGRIN1 PATHWAY | Beta1 integrin cell surface interactions |
0.3 | 20.9 | PID FRA PATHWAY | Validated transcriptional targets of AP1 family members Fra1 and Fra2 |
0.2 | 12.1 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
0.2 | 11.2 | PID ALK1 PATHWAY | ALK1 signaling events |
0.2 | 10.8 | PID PRL SIGNALING EVENTS PATHWAY | Signaling events mediated by PRL |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 40.0 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.2 | 31.7 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |
0.4 | 24.5 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.2 | 20.8 | REACTOME CELL JUNCTION ORGANIZATION | Genes involved in Cell junction organization |
0.6 | 17.4 | REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS | Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs) |
0.1 | 16.4 | REACTOME PHASE II CONJUGATION | Genes involved in Phase II conjugation |
1.1 | 15.3 | REACTOME CREATION OF C4 AND C2 ACTIVATORS | Genes involved in Creation of C4 and C2 activators |
0.5 | 12.5 | REACTOME HDL MEDIATED LIPID TRANSPORT | Genes involved in HDL-mediated lipid transport |
0.2 | 11.8 | REACTOME TIGHT JUNCTION INTERACTIONS | Genes involved in Tight junction interactions |
0.1 | 11.6 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |