Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
IRX4 | hg38_v1_chr5_-_1882902_1882932 | -0.21 | 2.5e-01 | Click! |
IRX6 | hg38_v1_chr16_+_55324191_55324208 | -0.11 | 5.6e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr13_-_46142834 Show fit | 3.11 |
ENST00000674665.1
|
lymphocyte cytosolic protein 1 |
|
chr1_-_150808251 Show fit | 2.55 |
ENST00000271651.8
ENST00000676970.1 ENST00000679260.1 ENST00000676751.1 ENST00000677887.1 |
cathepsin K |
|
chr14_-_106154113 Show fit | 2.44 |
ENST00000390603.2
|
immunoglobulin heavy variable 3-15 |
|
chr15_+_88635626 Show fit | 2.05 |
ENST00000379224.10
|
interferon stimulated exonuclease gene 20 |
|
chr5_+_55024250 Show fit | 2.01 |
ENST00000231009.3
|
granzyme K |
|
chr8_-_100712761 Show fit | 1.91 |
ENST00000517403.5
|
poly(A) binding protein cytoplasmic 1 |
|
chr1_+_26317950 Show fit | 1.49 |
ENST00000374213.3
|
CD52 molecule |
|
chr12_-_76068933 Show fit | 1.48 |
ENST00000552056.5
|
nucleosome assembly protein 1 like 1 |
|
chr6_+_144330797 Show fit | 1.46 |
ENST00000628146.2
|
utrophin |
|
chr14_+_21918161 Show fit | 1.43 |
ENST00000390439.2
|
T cell receptor alpha variable 13-2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.1 | GO:0071803 | positive regulation of podosome assembly(GO:0071803) |
0.2 | 2.6 | GO:0001957 | intramembranous ossification(GO:0001957) direct ossification(GO:0036072) |
0.0 | 2.4 | GO:0006910 | phagocytosis, recognition(GO:0006910) |
0.1 | 2.3 | GO:0015695 | organic cation transport(GO:0015695) |
0.5 | 2.0 | GO:0000738 | DNA catabolic process, exonucleolytic(GO:0000738) |
0.1 | 1.9 | GO:2000623 | regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:2000622) negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:2000623) |
0.1 | 1.5 | GO:0014894 | response to muscle inactivity involved in regulation of muscle adaptation(GO:0014877) response to denervation involved in regulation of muscle adaptation(GO:0014894) |
0.1 | 1.5 | GO:0009756 | carbohydrate mediated signaling(GO:0009756) |
0.0 | 1.5 | GO:0045730 | respiratory burst(GO:0045730) |
0.0 | 1.5 | GO:0006334 | nucleosome assembly(GO:0006334) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.1 | GO:0001891 | phagocytic cup(GO:0001891) |
0.4 | 2.6 | GO:0036021 | endolysosome lumen(GO:0036021) |
0.0 | 2.4 | GO:0042571 | immunoglobulin complex, circulating(GO:0042571) |
0.0 | 2.0 | GO:0015030 | Cajal body(GO:0015030) |
0.0 | 1.9 | GO:1990124 | messenger ribonucleoprotein complex(GO:1990124) |
0.1 | 1.5 | GO:0070938 | contractile ring(GO:0070938) |
0.0 | 1.3 | GO:0032420 | stereocilium(GO:0032420) |
0.0 | 0.9 | GO:0005921 | gap junction(GO:0005921) |
0.0 | 0.9 | GO:0001772 | immunological synapse(GO:0001772) |
0.1 | 0.8 | GO:0044530 | supraspliceosomal complex(GO:0044530) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.6 | GO:0001968 | fibronectin binding(GO:0001968) |
0.0 | 2.4 | GO:0034987 | immunoglobulin receptor binding(GO:0034987) |
0.2 | 2.3 | GO:0019534 | toxin transporter activity(GO:0019534) |
0.1 | 2.3 | GO:0008494 | translation activator activity(GO:0008494) |
0.7 | 2.0 | GO:0008859 | exoribonuclease II activity(GO:0008859) |
0.0 | 1.5 | GO:0038187 | signaling pattern recognition receptor activity(GO:0008329) pattern recognition receptor activity(GO:0038187) |
0.0 | 1.5 | GO:0017166 | vinculin binding(GO:0017166) |
0.0 | 1.3 | GO:0070330 | aromatase activity(GO:0070330) |
0.0 | 1.3 | GO:0008510 | sodium:bicarbonate symporter activity(GO:0008510) |
0.1 | 1.2 | GO:1904929 | coreceptor activity involved in Wnt signaling pathway(GO:0071936) coreceptor activity involved in Wnt signaling pathway, planar cell polarity pathway(GO:1904929) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.5 | SA TRKA RECEPTOR | The TrkA receptor binds nerve growth factor to activate MAP kinase pathways and promote cell growth. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 2.6 | REACTOME TRAFFICKING AND PROCESSING OF ENDOSOMAL TLR | Genes involved in Trafficking and processing of endosomal TLR |
0.0 | 2.3 | REACTOME BASIGIN INTERACTIONS | Genes involved in Basigin interactions |
0.0 | 2.2 | REACTOME MRNA SPLICING | Genes involved in mRNA Splicing |
0.0 | 2.0 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.0 | 1.9 | REACTOME DEADENYLATION OF MRNA | Genes involved in Deadenylation of mRNA |
0.1 | 1.3 | REACTOME ENDOGENOUS STEROLS | Genes involved in Endogenous sterols |
0.0 | 0.6 | REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE | Genes involved in Reversible Hydration of Carbon Dioxide |
0.0 | 0.5 | REACTOME SOS MEDIATED SIGNALLING | Genes involved in SOS-mediated signalling |
0.0 | 0.5 | REACTOME GAP JUNCTION ASSEMBLY | Genes involved in Gap junction assembly |
0.0 | 0.4 | REACTOME SYNTHESIS OF PIPS AT THE EARLY ENDOSOME MEMBRANE | Genes involved in Synthesis of PIPs at the early endosome membrane |