Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
KLF14 | hg38_v1_chr7_-_130734207_130734207 | 0.39 | 2.9e-02 | Click! |
SP8 | hg38_v1_chr7_-_20786879_20786891 | 0.14 | 4.5e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr17_-_979726 Show fit | 4.84 |
ENST00000336868.8
|
nucleoredoxin |
|
chr11_+_46381645 Show fit | 4.62 |
ENST00000617138.4
ENST00000395566.9 ENST00000395569.8 |
midkine |
|
chr19_-_11197516 Show fit | 3.87 |
ENST00000592903.5
ENST00000586659.6 ENST00000589359.5 ENST00000588724.5 |
KN motif and ankyrin repeat domains 2 |
|
chr19_+_11538767 Show fit | 3.19 |
ENST00000592923.5
ENST00000535659.6 |
calponin 1 |
|
chr22_+_31081310 Show fit | 3.17 |
ENST00000426927.5
ENST00000482444.5 ENST00000440425.5 ENST00000333137.12 ENST00000358743.5 ENST00000347557.6 |
smoothelin |
|
chr11_+_46277648 Show fit | 3.16 |
ENST00000621158.5
|
cAMP responsive element binding protein 3 like 1 |
|
chr6_-_31729785 Show fit | 3.08 |
ENST00000416410.6
|
dimethylarginine dimethylaminohydrolase 2 |
|
chr19_+_11538844 Show fit | 3.07 |
ENST00000252456.7
|
calponin 1 |
|
chr11_+_46381698 Show fit | 2.88 |
ENST00000395565.5
|
midkine |
|
chr1_+_32753991 Show fit | 2.75 |
ENST00000373481.7
|
KIAA1522 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.9 | 13.1 | GO:0030421 | defecation(GO:0030421) |
0.3 | 8.0 | GO:0000052 | citrulline metabolic process(GO:0000052) |
0.1 | 8.0 | GO:0045600 | positive regulation of fat cell differentiation(GO:0045600) |
0.0 | 8.0 | GO:0007283 | spermatogenesis(GO:0007283) |
0.2 | 6.4 | GO:0044458 | motile cilium assembly(GO:0044458) |
0.3 | 6.3 | GO:1904706 | negative regulation of vascular smooth muscle cell proliferation(GO:1904706) |
0.1 | 6.3 | GO:0009301 | snRNA transcription(GO:0009301) snRNA transcription from RNA polymerase II promoter(GO:0042795) |
0.5 | 5.8 | GO:0070294 | renal sodium ion absorption(GO:0070294) |
0.4 | 5.4 | GO:2000622 | regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:2000622) negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:2000623) |
0.3 | 5.2 | GO:0070307 | lens fiber cell development(GO:0070307) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 25.3 | GO:0005925 | focal adhesion(GO:0005925) |
0.1 | 9.1 | GO:0005913 | cell-cell adherens junction(GO:0005913) |
0.0 | 9.0 | GO:0005815 | microtubule organizing center(GO:0005815) |
0.1 | 8.3 | GO:0031093 | platelet alpha granule lumen(GO:0031093) |
0.0 | 7.5 | GO:0016604 | nuclear body(GO:0016604) |
0.4 | 6.2 | GO:0098651 | basement membrane collagen trimer(GO:0098651) |
0.0 | 5.9 | GO:0000790 | nuclear chromatin(GO:0000790) |
0.0 | 5.3 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
0.1 | 4.4 | GO:0035098 | ESC/E(Z) complex(GO:0035098) |
0.1 | 4.1 | GO:1990124 | messenger ribonucleoprotein complex(GO:1990124) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 15.9 | GO:0008201 | heparin binding(GO:0008201) |
1.1 | 9.1 | GO:0016403 | dimethylargininase activity(GO:0016403) |
0.0 | 9.0 | GO:0005198 | structural molecule activity(GO:0005198) |
0.0 | 6.5 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.1 | 6.2 | GO:0031492 | nucleosomal DNA binding(GO:0031492) |
0.1 | 5.7 | GO:0005201 | extracellular matrix structural constituent(GO:0005201) |
0.2 | 5.5 | GO:0008494 | translation activator activity(GO:0008494) |
0.6 | 5.2 | GO:1990254 | keratin filament binding(GO:1990254) |
0.1 | 5.1 | GO:0035497 | cAMP response element binding(GO:0035497) |
0.0 | 4.8 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 17.7 | PID SYNDECAN 4 PATHWAY | Syndecan-4-mediated signaling events |
0.1 | 9.6 | PID AURORA B PATHWAY | Aurora B signaling |
0.0 | 8.0 | NABA SECRETED FACTORS | Genes encoding secreted soluble factors |
0.0 | 7.4 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.1 | 6.9 | NABA BASEMENT MEMBRANES | Genes encoding structural components of basement membranes |
0.1 | 6.7 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
0.0 | 5.4 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.1 | 5.3 | PID LIS1 PATHWAY | Lissencephaly gene (LIS1) in neuronal migration and development |
0.1 | 5.1 | PID ECADHERIN STABILIZATION PATHWAY | Stabilization and expansion of the E-cadherin adherens junction |
0.1 | 4.9 | PID TAP63 PATHWAY | Validated transcriptional targets of TAp63 isoforms |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 7.3 | REACTOME DEADENYLATION OF MRNA | Genes involved in Deadenylation of mRNA |
0.0 | 7.3 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |
0.1 | 7.2 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.1 | 4.9 | REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS | Genes involved in Caspase-mediated cleavage of cytoskeletal proteins |
0.0 | 4.4 | REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION | Genes involved in Transcriptional Regulation of White Adipocyte Differentiation |
0.1 | 4.1 | REACTOME YAP1 AND WWTR1 TAZ STIMULATED GENE EXPRESSION | Genes involved in YAP1- and WWTR1 (TAZ)-stimulated gene expression |
0.1 | 4.0 | REACTOME RNA POL III TRANSCRIPTION INITIATION FROM TYPE 3 PROMOTER | Genes involved in RNA Polymerase III Transcription Initiation From Type 3 Promoter |
0.1 | 3.7 | REACTOME TIGHT JUNCTION INTERACTIONS | Genes involved in Tight junction interactions |
0.1 | 3.4 | REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS | Genes involved in Cell-extracellular matrix interactions |
0.1 | 3.3 | REACTOME INTERACTIONS OF VPR WITH HOST CELLULAR PROTEINS | Genes involved in Interactions of Vpr with host cellular proteins |