Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
LHX6 | hg38_v1_chr9_-_122213903_122213937 | 0.35 | 5.1e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr2_-_89010515 Show fit | 1.85 |
ENST00000493819.1
|
immunoglobulin kappa variable 1-9 |
|
chr2_-_89177160 Show fit | 1.52 |
ENST00000484817.1
|
immunoglobulin kappa variable 2-24 |
|
chr12_-_9607903 Show fit | 1.40 |
ENST00000229402.4
|
killer cell lectin like receptor B1 |
|
chr2_+_90038848 Show fit | 1.38 |
ENST00000390270.2
|
immunoglobulin kappa variable 3D-20 |
|
chr6_-_166627244 Show fit | 1.24 |
ENST00000265678.9
|
ribosomal protein S6 kinase A2 |
|
chr12_-_44875647 Show fit | 1.13 |
ENST00000395487.6
|
neural EGFL like 2 |
|
chr3_+_108822778 Show fit | 1.12 |
ENST00000295756.11
|
T cell receptor associated transmembrane adaptor 1 |
|
chr2_+_90004792 Show fit | 1.11 |
ENST00000462693.1
|
immunoglobulin kappa variable 2D-24 (non-functional) |
|
chr2_-_88861563 Show fit | 1.11 |
ENST00000624935.3
ENST00000390241.3 |
novel transcript immunoglobulin kappa joining 2 |
|
chr12_-_44876294 Show fit | 1.09 |
ENST00000429094.7
ENST00000551601.5 ENST00000549027.5 ENST00000452445.6 |
neural EGFL like 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.9 | GO:0002377 | immunoglobulin production(GO:0002377) |
0.2 | 3.7 | GO:0070050 | neuron cellular homeostasis(GO:0070050) |
0.3 | 2.0 | GO:0001920 | negative regulation of receptor recycling(GO:0001920) |
0.4 | 1.3 | GO:0010877 | lipid transport involved in lipid storage(GO:0010877) |
0.2 | 1.3 | GO:1904694 | negative regulation of vascular smooth muscle contraction(GO:1904694) |
0.0 | 1.3 | GO:0007091 | metaphase/anaphase transition of mitotic cell cycle(GO:0007091) |
0.0 | 1.2 | GO:0002260 | lymphocyte homeostasis(GO:0002260) |
0.0 | 1.1 | GO:0048268 | clathrin coat assembly(GO:0048268) |
0.3 | 1.0 | GO:0071140 | resolution of recombination intermediates(GO:0071139) resolution of mitotic recombination intermediates(GO:0071140) |
0.1 | 1.0 | GO:0045654 | positive regulation of megakaryocyte differentiation(GO:0045654) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.4 | GO:0101003 | ficolin-1-rich granule membrane(GO:0101003) |
0.0 | 1.3 | GO:0032420 | stereocilium(GO:0032420) |
0.1 | 1.0 | GO:0033063 | Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063) |
0.3 | 0.9 | GO:0005600 | collagen type XIII trimer(GO:0005600) transmembrane collagen trimer(GO:0030936) |
0.3 | 0.8 | GO:1990332 | Ire1 complex(GO:1990332) |
0.1 | 0.8 | GO:0005589 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
0.0 | 0.8 | GO:0043020 | NADPH oxidase complex(GO:0043020) |
0.0 | 0.8 | GO:0000930 | gamma-tubulin complex(GO:0000930) |
0.0 | 0.8 | GO:0042101 | T cell receptor complex(GO:0042101) |
0.1 | 0.6 | GO:0005658 | alpha DNA polymerase:primase complex(GO:0005658) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.7 | GO:0003823 | antigen binding(GO:0003823) |
0.1 | 2.0 | GO:0005068 | transmembrane receptor protein tyrosine kinase adaptor activity(GO:0005068) |
0.0 | 2.0 | GO:0004715 | non-membrane spanning protein tyrosine kinase activity(GO:0004715) |
0.0 | 1.7 | GO:0001784 | phosphotyrosine binding(GO:0001784) |
0.1 | 1.6 | GO:0017127 | cholesterol transporter activity(GO:0017127) |
0.0 | 1.3 | GO:0030971 | receptor tyrosine kinase binding(GO:0030971) |
0.1 | 1.1 | GO:0035612 | AP-2 adaptor complex binding(GO:0035612) |
0.2 | 1.0 | GO:0044378 | non-sequence-specific DNA binding, bending(GO:0044378) |
0.1 | 1.0 | GO:0008821 | crossover junction endodeoxyribonuclease activity(GO:0008821) |
0.2 | 0.9 | GO:0048248 | CXCR3 chemokine receptor binding(GO:0048248) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.6 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.0 | 2.0 | PID FRA PATHWAY | Validated transcriptional targets of AP1 family members Fra1 and Fra2 |
0.0 | 1.6 | SIG PIP3 SIGNALING IN B LYMPHOCYTES | Genes related to PIP3 signaling in B lymphocytes |
0.0 | 1.4 | NABA COLLAGENS | Genes encoding collagen proteins |
0.0 | 1.1 | PID ANGIOPOIETIN RECEPTOR PATHWAY | Angiopoietin receptor Tie2-mediated signaling |
0.0 | 1.0 | PID FANCONI PATHWAY | Fanconi anemia pathway |
0.0 | 0.9 | PID CXCR3 PATHWAY | CXCR3-mediated signaling events |
0.0 | 0.9 | PID AURORA A PATHWAY | Aurora A signaling |
0.0 | 0.5 | ST TYPE I INTERFERON PATHWAY | Type I Interferon (alpha/beta IFN) Pathway |
0.0 | 0.5 | PID FAK PATHWAY | Signaling events mediated by focal adhesion kinase |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.0 | REACTOME DOWNSTREAM TCR SIGNALING | Genes involved in Downstream TCR signaling |
0.0 | 1.7 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.0 | 1.4 | REACTOME STEROID HORMONES | Genes involved in Steroid hormones |
0.0 | 1.3 | REACTOME ERK MAPK TARGETS | Genes involved in ERK/MAPK targets |
0.0 | 1.2 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.1 | 1.0 | REACTOME APOPTOSIS INDUCED DNA FRAGMENTATION | Genes involved in Apoptosis induced DNA fragmentation |
0.0 | 0.9 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
0.0 | 0.8 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.0 | 0.7 | REACTOME THE NLRP3 INFLAMMASOME | Genes involved in The NLRP3 inflammasome |
0.0 | 0.7 | REACTOME LATENT INFECTION OF HOMO SAPIENS WITH MYCOBACTERIUM TUBERCULOSIS | Genes involved in Latent infection of Homo sapiens with Mycobacterium tuberculosis |