Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
MAFK | hg38_v1_chr7_+_1530684_1530726 | -0.21 | 2.4e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr2_+_88885397 Show fit | 12.34 |
ENST00000390243.2
|
immunoglobulin kappa variable 4-1 |
|
chr1_+_198638457 Show fit | 8.99 |
ENST00000367379.6
|
protein tyrosine phosphatase receptor type C |
|
chr14_+_20955484 Show fit | 8.09 |
ENST00000304625.3
|
ribonuclease A family member 2 |
|
chr5_+_55102635 Show fit | 8.00 |
ENST00000274306.7
|
granzyme A |
|
chr1_+_198638723 Show fit | 7.85 |
ENST00000643513.1
|
protein tyrosine phosphatase receptor type C |
|
chr1_+_198638968 Show fit | 7.57 |
ENST00000348564.11
ENST00000530727.5 ENST00000442510.8 ENST00000645247.1 ENST00000367367.8 ENST00000367364.5 ENST00000413409.6 |
protein tyrosine phosphatase receptor type C |
|
chr1_+_158831323 Show fit | 7.19 |
ENST00000368141.5
|
myeloid cell nuclear differentiation antigen |
|
chr14_-_106538331 Show fit | 6.82 |
ENST00000390624.3
|
immunoglobulin heavy variable 3-48 |
|
chr7_+_142300924 Show fit | 5.72 |
ENST00000455382.2
|
T cell receptor beta variable 2 |
|
chr1_-_169711603 Show fit | 5.61 |
ENST00000236147.6
ENST00000650983.1 |
selectin L |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 123.1 | GO:0006958 | complement activation, classical pathway(GO:0006958) |
0.2 | 35.3 | GO:0002377 | immunoglobulin production(GO:0002377) |
5.7 | 28.7 | GO:2000471 | regulation of hematopoietic stem cell migration(GO:2000471) positive regulation of hematopoietic stem cell migration(GO:2000473) |
0.3 | 16.4 | GO:0002228 | natural killer cell mediated immunity(GO:0002228) |
0.4 | 14.4 | GO:0002717 | positive regulation of natural killer cell mediated immunity(GO:0002717) |
0.5 | 14.3 | GO:0042832 | defense response to protozoan(GO:0042832) |
0.9 | 12.7 | GO:0043152 | induction of bacterial agglutination(GO:0043152) |
0.1 | 12.3 | GO:0006968 | cellular defense response(GO:0006968) |
0.5 | 10.1 | GO:0010918 | positive regulation of mitochondrial membrane potential(GO:0010918) |
0.4 | 9.6 | GO:0030889 | negative regulation of B cell proliferation(GO:0030889) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 57.2 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.8 | 43.2 | GO:0042571 | immunoglobulin complex, circulating(GO:0042571) |
0.2 | 39.0 | GO:0072562 | blood microparticle(GO:0072562) |
0.2 | 26.1 | GO:0101003 | ficolin-1-rich granule membrane(GO:0101003) |
0.2 | 25.7 | GO:0035578 | azurophil granule lumen(GO:0035578) |
0.2 | 12.7 | GO:0001772 | immunological synapse(GO:0001772) |
2.2 | 8.7 | GO:0071757 | hexameric IgM immunoglobulin complex(GO:0071757) |
0.1 | 8.6 | GO:0070821 | tertiary granule membrane(GO:0070821) |
0.2 | 8.2 | GO:0008180 | COP9 signalosome(GO:0008180) |
0.1 | 6.6 | GO:0044298 | neuronal cell body membrane(GO:0032809) cell body membrane(GO:0044298) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 111.4 | GO:0003823 | antigen binding(GO:0003823) |
0.6 | 43.2 | GO:0034987 | immunoglobulin receptor binding(GO:0034987) |
0.6 | 24.9 | GO:0019198 | transmembrane receptor protein tyrosine phosphatase activity(GO:0005001) transmembrane receptor protein phosphatase activity(GO:0019198) |
0.4 | 14.3 | GO:0008329 | signaling pattern recognition receptor activity(GO:0008329) pattern recognition receptor activity(GO:0038187) |
1.8 | 14.2 | GO:0023029 | MHC class Ib protein binding(GO:0023029) |
1.7 | 11.8 | GO:0019862 | IgA binding(GO:0019862) |
0.2 | 9.7 | GO:0043539 | protein serine/threonine kinase activator activity(GO:0043539) |
0.1 | 9.3 | GO:0004715 | non-membrane spanning protein tyrosine kinase activity(GO:0004715) |
2.9 | 8.6 | GO:0050528 | acyloxyacyl hydrolase activity(GO:0050528) |
0.0 | 8.5 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 31.0 | SIG PIP3 SIGNALING IN B LYMPHOCYTES | Genes related to PIP3 signaling in B lymphocytes |
0.2 | 10.2 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.1 | 10.0 | PID TCR PATHWAY | TCR signaling in naïve CD4+ T cells |
0.2 | 6.6 | SA FAS SIGNALING | The TNF-type receptor Fas induces apoptosis on ligand binding. |
0.1 | 6.3 | PID GMCSF PATHWAY | GMCSF-mediated signaling events |
0.1 | 5.9 | PID IL12 2PATHWAY | IL12-mediated signaling events |
0.2 | 5.6 | PID IL5 PATHWAY | IL5-mediated signaling events |
0.1 | 5.6 | SA MMP CYTOKINE CONNECTION | Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix. |
0.1 | 5.6 | PID RAC1 PATHWAY | RAC1 signaling pathway |
0.0 | 5.4 | PID P53 DOWNSTREAM PATHWAY | Direct p53 effectors |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 43.7 | REACTOME IMMUNOREGULATORY INTERACTIONS BETWEEN A LYMPHOID AND A NON LYMPHOID CELL | Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell |
1.2 | 33.6 | REACTOME PHOSPHORYLATION OF CD3 AND TCR ZETA CHAINS | Genes involved in Phosphorylation of CD3 and TCR zeta chains |
0.1 | 12.6 | REACTOME INTERFERON GAMMA SIGNALING | Genes involved in Interferon gamma signaling |
0.1 | 9.3 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
0.1 | 7.2 | REACTOME IL RECEPTOR SHC SIGNALING | Genes involved in Interleukin receptor SHC signaling |
0.2 | 6.6 | REACTOME BETA DEFENSINS | Genes involved in Beta defensins |
0.1 | 6.3 | REACTOME INHIBITION OF VOLTAGE GATED CA2 CHANNELS VIA GBETA GAMMA SUBUNITS | Genes involved in Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits |
0.1 | 6.2 | REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX | Genes involved in Formation of the ternary complex, and subsequently, the 43S complex |
0.1 | 6.1 | REACTOME CYTOCHROME P450 ARRANGED BY SUBSTRATE TYPE | Genes involved in Cytochrome P450 - arranged by substrate type |
0.2 | 5.5 | REACTOME REGULATION OF COMPLEMENT CASCADE | Genes involved in Regulation of Complement cascade |