Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
MECP2 | hg38_v1_chrX_-_154097731_154097746 | 0.45 | 1.1e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_-_95516616 Show fit | 2.72 |
ENST00000682763.1
|
spectrin repeat containing nuclear envelope family member 3 |
|
chr11_+_289108 Show fit | 2.62 |
ENST00000409548.7
|
protein-glucosylgalactosylhydroxylysine glucosidase |
|
chr20_+_13221257 Show fit | 2.54 |
ENST00000262487.5
|
isthmin 1 |
|
chr10_+_6144883 Show fit | 2.46 |
ENST00000379789.8
|
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 |
|
chr22_-_50261543 Show fit | 2.39 |
ENST00000395778.3
ENST00000215659.13 |
mitogen-activated protein kinase 12 |
|
chr10_+_132397168 Show fit | 2.31 |
ENST00000631148.2
ENST00000305233.6 |
PWWP domain containing 2B |
|
chr1_+_203305510 Show fit | 2.25 |
ENST00000290551.5
|
BTG anti-proliferation factor 2 |
|
chr1_+_223712491 Show fit | 2.19 |
ENST00000295006.6
|
calpain 2 |
|
chr5_+_179806376 Show fit | 2.16 |
ENST00000514093.5
|
sequestosome 1 |
|
chr16_-_85011463 Show fit | 2.05 |
ENST00000564466.5
ENST00000313732.9 |
zinc finger DHHC-type palmitoyltransferase 7 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 28.3 | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane(GO:0006614) |
0.0 | 24.3 | GO:0002283 | neutrophil activation involved in immune response(GO:0002283) neutrophil degranulation(GO:0043312) |
0.2 | 15.9 | GO:0035924 | cellular response to vascular endothelial growth factor stimulus(GO:0035924) |
0.3 | 11.7 | GO:0000027 | ribosomal large subunit assembly(GO:0000027) |
0.3 | 7.7 | GO:0000028 | ribosomal small subunit assembly(GO:0000028) |
0.0 | 7.7 | GO:0038095 | Fc-epsilon receptor signaling pathway(GO:0038095) |
0.1 | 7.6 | GO:1904837 | beta-catenin-TCF complex assembly(GO:1904837) |
0.2 | 7.1 | GO:0045589 | regulation of regulatory T cell differentiation(GO:0045589) |
0.1 | 7.1 | GO:0000186 | activation of MAPKK activity(GO:0000186) |
0.1 | 6.8 | GO:0048701 | embryonic cranial skeleton morphogenesis(GO:0048701) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 50.2 | GO:0005654 | nucleoplasm(GO:0005654) |
0.2 | 26.6 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
0.1 | 18.4 | GO:0000790 | nuclear chromatin(GO:0000790) |
0.0 | 18.0 | GO:0005925 | focal adhesion(GO:0005925) |
0.1 | 15.7 | GO:0035578 | azurophil granule lumen(GO:0035578) |
0.1 | 15.6 | GO:0101002 | ficolin-1-rich granule(GO:0101002) ficolin-1-rich granule lumen(GO:1904813) |
0.2 | 15.1 | GO:0022627 | cytosolic small ribosomal subunit(GO:0022627) |
0.0 | 13.5 | GO:0005765 | lysosomal membrane(GO:0005765) lytic vacuole membrane(GO:0098852) |
0.1 | 12.6 | GO:0016605 | PML body(GO:0016605) |
0.0 | 12.4 | GO:0016607 | nuclear speck(GO:0016607) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 52.9 | GO:0000978 | RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978) |
0.0 | 39.2 | GO:0003677 | DNA binding(GO:0003677) |
0.1 | 24.4 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
0.2 | 17.3 | GO:0019843 | rRNA binding(GO:0019843) |
0.1 | 12.3 | GO:0005089 | Rho guanyl-nucleotide exchange factor activity(GO:0005089) |
0.1 | 10.9 | GO:0003823 | antigen binding(GO:0003823) |
0.1 | 9.7 | GO:0003743 | translation initiation factor activity(GO:0003743) |
0.0 | 8.8 | GO:0003714 | transcription corepressor activity(GO:0003714) |
0.0 | 7.9 | GO:0051015 | actin filament binding(GO:0051015) |
0.0 | 7.4 | GO:0001228 | transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 20.4 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
0.2 | 17.9 | PID CD8 TCR DOWNSTREAM PATHWAY | Downstream signaling in naïve CD8+ T cells |
0.2 | 16.6 | PID FOXO PATHWAY | FoxO family signaling |
0.2 | 14.7 | PID HIV NEF PATHWAY | HIV-1 Nef: Negative effector of Fas and TNF-alpha |
0.2 | 14.3 | ST ERK1 ERK2 MAPK PATHWAY | ERK1/ERK2 MAPK Pathway |
0.1 | 13.6 | PID P53 DOWNSTREAM PATHWAY | Direct p53 effectors |
0.0 | 12.9 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 11.5 | PID MTOR 4PATHWAY | mTOR signaling pathway |
0.1 | 11.4 | PID RB 1PATHWAY | Regulation of retinoblastoma protein |
0.2 | 11.2 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 40.6 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |
0.1 | 22.1 | REACTOME GENERIC TRANSCRIPTION PATHWAY | Genes involved in Generic Transcription Pathway |
0.1 | 21.8 | REACTOME MRNA SPLICING | Genes involved in mRNA Splicing |
0.1 | 13.8 | REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION | Genes involved in Transcriptional Regulation of White Adipocyte Differentiation |
0.2 | 11.0 | REACTOME YAP1 AND WWTR1 TAZ STIMULATED GENE EXPRESSION | Genes involved in YAP1- and WWTR1 (TAZ)-stimulated gene expression |
0.3 | 9.7 | REACTOME P38MAPK EVENTS | Genes involved in p38MAPK events |
0.1 | 9.0 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.2 | 8.8 | REACTOME 3 UTR MEDIATED TRANSLATIONAL REGULATION | Genes involved in 3' -UTR-mediated translational regulation |
0.1 | 8.8 | REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE | Genes involved in Amino acid transport across the plasma membrane |
0.2 | 8.1 | REACTOME EXTRINSIC PATHWAY FOR APOPTOSIS | Genes involved in Extrinsic Pathway for Apoptosis |