Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
MEIS2 | hg38_v1_chr15_-_37098281_37098371 | -0.79 | 9.0e-08 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 92.9 | GO:0002283 | neutrophil activation involved in immune response(GO:0002283) neutrophil degranulation(GO:0043312) |
0.5 | 73.9 | GO:0031295 | T cell costimulation(GO:0031295) |
0.3 | 49.6 | GO:0038094 | Fc-gamma receptor signaling pathway(GO:0038094) |
0.5 | 40.6 | GO:0006968 | cellular defense response(GO:0006968) |
0.1 | 34.9 | GO:0050911 | detection of chemical stimulus involved in sensory perception of smell(GO:0050911) |
0.2 | 27.3 | GO:0002377 | immunoglobulin production(GO:0002377) |
0.3 | 22.9 | GO:0006910 | phagocytosis, recognition(GO:0006910) |
1.0 | 17.5 | GO:0002517 | T cell tolerance induction(GO:0002517) |
0.2 | 16.8 | GO:0038083 | peptidyl-tyrosine autophosphorylation(GO:0038083) |
0.1 | 16.6 | GO:0050851 | antigen receptor-mediated signaling pathway(GO:0050851) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 102.8 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.2 | 60.3 | GO:0031234 | extrinsic component of cytoplasmic side of plasma membrane(GO:0031234) |
0.2 | 42.9 | GO:0016605 | PML body(GO:0016605) |
0.3 | 38.5 | GO:0101003 | ficolin-1-rich granule membrane(GO:0101003) |
0.2 | 28.3 | GO:0035578 | azurophil granule lumen(GO:0035578) |
0.7 | 26.7 | GO:0001891 | phagocytic cup(GO:0001891) |
0.4 | 24.4 | GO:0019814 | immunoglobulin complex(GO:0019814) immunoglobulin complex, circulating(GO:0042571) |
1.0 | 22.8 | GO:0042101 | T cell receptor complex(GO:0042101) |
0.1 | 21.4 | GO:0000790 | nuclear chromatin(GO:0000790) |
0.2 | 20.9 | GO:0035580 | specific granule lumen(GO:0035580) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 93.9 | GO:0003823 | antigen binding(GO:0003823) |
0.4 | 45.0 | GO:0004715 | non-membrane spanning protein tyrosine kinase activity(GO:0004715) |
0.1 | 27.2 | GO:0030695 | GTPase regulator activity(GO:0030695) |
0.1 | 25.9 | GO:0004984 | olfactory receptor activity(GO:0004984) |
0.1 | 20.9 | GO:0017137 | Rab GTPase binding(GO:0017137) |
0.6 | 19.6 | GO:0042605 | peptide antigen binding(GO:0042605) |
1.7 | 18.7 | GO:0030369 | ICAM-3 receptor activity(GO:0030369) |
1.0 | 17.9 | GO:0019864 | IgG binding(GO:0019864) |
0.4 | 16.8 | GO:0005540 | hyaluronic acid binding(GO:0005540) |
0.5 | 15.7 | GO:0042288 | MHC class I protein binding(GO:0042288) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 81.7 | PID CD8 TCR PATHWAY | TCR signaling in naïve CD8+ T cells |
0.7 | 44.9 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.7 | 28.8 | SA MMP CYTOKINE CONNECTION | Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix. |
0.3 | 25.2 | PID BCR 5PATHWAY | BCR signaling pathway |
0.4 | 24.8 | PID IL8 CXCR2 PATHWAY | IL8- and CXCR2-mediated signaling events |
0.3 | 18.9 | PID CD8 TCR DOWNSTREAM PATHWAY | Downstream signaling in naïve CD8+ T cells |
0.5 | 18.3 | PID TOLL ENDOGENOUS PATHWAY | Endogenous TLR signaling |
0.3 | 16.4 | PID IFNG PATHWAY | IFN-gamma pathway |
0.4 | 15.8 | PID IL12 STAT4 PATHWAY | IL12 signaling mediated by STAT4 |
0.2 | 14.9 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 83.0 | REACTOME IMMUNOREGULATORY INTERACTIONS BETWEEN A LYMPHOID AND A NON LYMPHOID CELL | Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell |
0.4 | 46.6 | REACTOME INTERFERON GAMMA SIGNALING | Genes involved in Interferon gamma signaling |
1.4 | 39.4 | REACTOME PHOSPHORYLATION OF CD3 AND TCR ZETA CHAINS | Genes involved in Phosphorylation of CD3 and TCR zeta chains |
0.4 | 27.2 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
0.1 | 26.9 | REACTOME OLFACTORY SIGNALING PATHWAY | Genes involved in Olfactory Signaling Pathway |
0.2 | 20.7 | REACTOME ANTIGEN PROCESSING CROSS PRESENTATION | Genes involved in Antigen processing-Cross presentation |
0.1 | 19.9 | REACTOME G ALPHA I SIGNALLING EVENTS | Genes involved in G alpha (i) signalling events |
0.4 | 18.9 | REACTOME TCR SIGNALING | Genes involved in TCR signaling |
0.5 | 17.9 | REACTOME GENERATION OF SECOND MESSENGER MOLECULES | Genes involved in Generation of second messenger molecules |
0.5 | 14.9 | REACTOME CITRIC ACID CYCLE TCA CYCLE | Genes involved in Citric acid cycle (TCA cycle) |