Illumina Body Map 2 (GSE30611)
Gene Symbol | Gene ID | Gene Info |
---|---|---|
ENSG00000185155.12 | Mix paired-like homeobox | |
ENSG00000169840.5 | GS homeobox 1 | |
ENSG00000188909.5 | brain specific homeobox | |
ENSG00000106511.6 | mesenchyme homeobox 2 | |
ENSG00000121454.6 | LIM homeobox 4 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
GSX1 | hg38_v1_chr13_+_27792479_27792485 | -0.38 | 3.1e-02 | Click! |
LHX4 | hg38_v1_chr1_+_180230257_180230291 | -0.32 | 7.0e-02 | Click! |
MIXL1 | hg38_v1_chr1_+_226223618_226223670 | 0.10 | 5.7e-01 | Click! |
MEOX2 | hg38_v1_chr7_-_15686671_15686689 | 0.07 | 7.2e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr3_+_108822778 Show fit | 4.45 |
ENST00000295756.11
|
T cell receptor associated transmembrane adaptor 1 |
|
chr3_+_108822759 Show fit | 4.23 |
ENST00000426646.1
|
T cell receptor associated transmembrane adaptor 1 |
|
chr4_+_40196907 Show fit | 4.22 |
ENST00000622175.4
ENST00000619474.4 ENST00000615083.4 ENST00000610353.4 ENST00000614836.1 |
ras homolog family member H |
|
chr13_-_46142834 Show fit | 4.06 |
ENST00000674665.1
|
lymphocyte cytosolic protein 1 |
|
chr2_-_157444044 Show fit | 4.02 |
ENST00000264192.8
|
cytohesin 1 interacting protein |
|
chrX_+_136648138 Show fit | 3.94 |
ENST00000370629.7
|
CD40 ligand |
|
chr7_+_142300924 Show fit | 3.77 |
ENST00000455382.2
|
T cell receptor beta variable 2 |
|
chr13_-_41019289 Show fit | 3.47 |
ENST00000239882.7
|
E74 like ETS transcription factor 1 |
|
chr15_+_58138368 Show fit | 3.36 |
ENST00000219919.9
ENST00000536493.1 |
aquaporin 9 |
|
chr1_-_183569186 Show fit | 3.30 |
ENST00000420553.5
ENST00000419402.1 |
neutrophil cytosolic factor 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 14.6 | GO:0002377 | immunoglobulin production(GO:0002377) |
0.0 | 10.8 | GO:0031424 | keratinization(GO:0031424) |
1.1 | 8.0 | GO:0001920 | negative regulation of receptor recycling(GO:0001920) |
0.1 | 7.7 | GO:0034260 | negative regulation of GTPase activity(GO:0034260) |
0.0 | 7.5 | GO:0006958 | complement activation, classical pathway(GO:0006958) |
1.3 | 6.5 | GO:1904823 | pyrimidine nucleobase transport(GO:0015855) purine nucleobase transmembrane transport(GO:1904823) |
0.2 | 5.9 | GO:2000353 | positive regulation of endothelial cell apoptotic process(GO:2000353) |
0.2 | 5.6 | GO:0072643 | interferon-gamma secretion(GO:0072643) |
1.7 | 5.1 | GO:0034769 | basement membrane disassembly(GO:0034769) |
0.7 | 5.0 | GO:1903435 | positive regulation of constitutive secretory pathway(GO:1903435) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 13.2 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.2 | 12.1 | GO:0001772 | immunological synapse(GO:0001772) |
0.3 | 9.6 | GO:0042101 | T cell receptor complex(GO:0042101) |
0.0 | 6.5 | GO:0035579 | specific granule membrane(GO:0035579) |
0.0 | 5.6 | GO:0005882 | intermediate filament(GO:0005882) |
0.7 | 5.1 | GO:0036021 | endolysosome lumen(GO:0036021) |
0.0 | 5.1 | GO:0001750 | photoreceptor outer segment(GO:0001750) |
0.1 | 4.9 | GO:0001891 | phagocytic cup(GO:0001891) |
0.2 | 4.6 | GO:0033093 | Weibel-Palade body(GO:0033093) |
0.1 | 4.3 | GO:0031092 | platelet alpha granule membrane(GO:0031092) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 12.8 | GO:0003823 | antigen binding(GO:0003823) |
0.3 | 8.1 | GO:0005068 | transmembrane receptor protein tyrosine kinase adaptor activity(GO:0005068) |
0.2 | 8.0 | GO:0005095 | GTPase inhibitor activity(GO:0005095) |
1.3 | 6.5 | GO:0005350 | pyrimidine nucleobase transmembrane transporter activity(GO:0005350) |
0.1 | 6.3 | GO:0034987 | immunoglobulin receptor binding(GO:0034987) |
0.0 | 6.3 | GO:0001227 | transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227) |
0.0 | 6.1 | GO:0030246 | carbohydrate binding(GO:0030246) |
2.0 | 5.9 | GO:0005174 | CD40 receptor binding(GO:0005174) |
0.2 | 5.8 | GO:0031489 | myosin V binding(GO:0031489) |
0.2 | 5.6 | GO:0016175 | superoxide-generating NADPH oxidase activity(GO:0016175) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 8.5 | PID TCR CALCIUM PATHWAY | Calcium signaling in the CD4+ TCR pathway |
0.1 | 7.5 | PID CD8 TCR PATHWAY | TCR signaling in naïve CD8+ T cells |
0.1 | 5.3 | PID IL12 STAT4 PATHWAY | IL12 signaling mediated by STAT4 |
0.0 | 5.1 | PID CASPASE PATHWAY | Caspase cascade in apoptosis |
0.0 | 4.6 | PID AR PATHWAY | Coregulation of Androgen receptor activity |
0.0 | 4.6 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 4.5 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.1 | 3.7 | PID IL2 STAT5 PATHWAY | IL2 signaling events mediated by STAT5 |
0.1 | 3.3 | SA MMP CYTOKINE CONNECTION | Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix. |
0.0 | 3.3 | PID RAC1 PATHWAY | RAC1 signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 17.4 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.1 | 8.3 | REACTOME IMMUNOREGULATORY INTERACTIONS BETWEEN A LYMPHOID AND A NON LYMPHOID CELL | Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell |
0.2 | 8.2 | REACTOME DOWNSTREAM TCR SIGNALING | Genes involved in Downstream TCR signaling |
0.3 | 7.9 | REACTOME PHOSPHORYLATION OF CD3 AND TCR ZETA CHAINS | Genes involved in Phosphorylation of CD3 and TCR zeta chains |
0.4 | 6.0 | REACTOME PASSIVE TRANSPORT BY AQUAPORINS | Genes involved in Passive Transport by Aquaporins |
0.5 | 5.1 | REACTOME ENDOSOMAL VACUOLAR PATHWAY | Genes involved in Endosomal/Vacuolar pathway |
0.0 | 5.0 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.1 | 4.9 | REACTOME INSULIN SYNTHESIS AND PROCESSING | Genes involved in Insulin Synthesis and Processing |
0.1 | 4.6 | REACTOME LATENT INFECTION OF HOMO SAPIENS WITH MYCOBACTERIUM TUBERCULOSIS | Genes involved in Latent infection of Homo sapiens with Mycobacterium tuberculosis |
0.1 | 4.1 | REACTOME EFFECTS OF PIP2 HYDROLYSIS | Genes involved in Effects of PIP2 hydrolysis |