Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
NFATC1 | hg38_v1_chr18_+_79400274_79400392 | 0.34 | 5.4e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr4_-_70666492 Show fit | 9.48 |
ENST00000254801.9
ENST00000391614.7 |
joining chain of multimeric IgA and IgM |
|
chr4_-_70666884 Show fit | 8.47 |
ENST00000510614.5
|
joining chain of multimeric IgA and IgM |
|
chr4_-_70666961 Show fit | 8.46 |
ENST00000510437.5
|
joining chain of multimeric IgA and IgM |
|
chr1_-_153544997 Show fit | 7.01 |
ENST00000368715.5
|
S100 calcium binding protein A4 |
|
chr1_-_203351115 Show fit | 4.71 |
ENST00000354955.5
|
fibromodulin |
|
chr14_-_91946989 Show fit | 4.15 |
ENST00000556154.5
|
fibulin 5 |
|
chr9_+_121299793 Show fit | 3.88 |
ENST00000373818.8
|
gelsolin |
|
chr1_+_85580751 Show fit | 3.72 |
ENST00000451137.7
|
cellular communication network factor 1 |
|
chr2_+_188974364 Show fit | 3.49 |
ENST00000304636.9
ENST00000317840.9 |
collagen type III alpha 1 chain |
|
chr2_+_1413456 Show fit | 3.45 |
ENST00000539820.5
ENST00000382269.7 ENST00000345913.8 ENST00000329066.9 ENST00000382201.7 |
thyroid peroxidase |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.3 | 24.8 | GO:0060267 | positive regulation of respiratory burst(GO:0060267) |
0.0 | 12.7 | GO:0065004 | protein-DNA complex assembly(GO:0065004) |
0.5 | 10.8 | GO:0019800 | peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan(GO:0019800) |
0.3 | 8.7 | GO:0045109 | intermediate filament organization(GO:0045109) |
0.0 | 8.2 | GO:0043484 | regulation of RNA splicing(GO:0043484) |
0.6 | 7.4 | GO:0048251 | elastic fiber assembly(GO:0048251) |
0.0 | 6.0 | GO:0001837 | epithelial to mesenchymal transition(GO:0001837) |
0.6 | 5.5 | GO:0048014 | Tie signaling pathway(GO:0048014) |
1.8 | 5.4 | GO:0002503 | peptide antigen assembly with MHC class II protein complex(GO:0002503) |
0.2 | 5.3 | GO:0003334 | keratinocyte development(GO:0003334) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
6.6 | 26.4 | GO:0071757 | hexameric IgM immunoglobulin complex(GO:0071757) |
0.1 | 15.0 | GO:0032993 | protein-DNA complex(GO:0032993) |
0.1 | 10.6 | GO:0097517 | stress fiber(GO:0001725) contractile actin filament bundle(GO:0097517) |
0.2 | 8.7 | GO:0005614 | interstitial matrix(GO:0005614) |
0.1 | 8.7 | GO:0005901 | caveola(GO:0005901) |
0.7 | 8.5 | GO:0098647 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
0.7 | 7.4 | GO:0071953 | elastic fiber(GO:0071953) |
0.3 | 5.4 | GO:0042613 | MHC class II protein complex(GO:0042613) |
0.0 | 4.8 | GO:0005811 | lipid particle(GO:0005811) |
0.0 | 4.7 | GO:0005882 | intermediate filament(GO:0005882) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
3.8 | 26.4 | GO:0019862 | IgA binding(GO:0019862) |
0.1 | 19.0 | GO:0005518 | collagen binding(GO:0005518) |
0.4 | 12.7 | GO:0001087 | transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting(GO:0001011) transcription factor activity, TFIIB-class binding(GO:0001087) |
0.0 | 9.2 | GO:0005178 | integrin binding(GO:0005178) |
0.0 | 9.2 | GO:0001077 | transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001077) |
0.9 | 7.7 | GO:0042289 | MHC class II protein binding(GO:0042289) |
0.3 | 7.0 | GO:0050786 | RAGE receptor binding(GO:0050786) |
0.1 | 5.5 | GO:0070742 | C2H2 zinc finger domain binding(GO:0070742) |
0.0 | 5.5 | GO:0044822 | mRNA binding(GO:0003729) poly(A) RNA binding(GO:0044822) |
0.3 | 5.2 | GO:0045159 | myosin II binding(GO:0045159) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 16.1 | PID AR PATHWAY | Coregulation of Androgen receptor activity |
0.0 | 15.4 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.2 | 14.2 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 12.9 | NABA SECRETED FACTORS | Genes encoding secreted soluble factors |
0.1 | 11.6 | PID REG GR PATHWAY | Glucocorticoid receptor regulatory network |
0.1 | 6.3 | PID ANGIOPOIETIN RECEPTOR PATHWAY | Angiopoietin receptor Tie2-mediated signaling |
0.1 | 5.7 | PID ARF6 PATHWAY | Arf6 signaling events |
0.1 | 5.5 | PID FRA PATHWAY | Validated transcriptional targets of AP1 family members Fra1 and Fra2 |
0.1 | 4.1 | PID SYNDECAN 1 PATHWAY | Syndecan-1-mediated signaling events |
0.0 | 4.1 | PID MYC REPRESS PATHWAY | Validated targets of C-MYC transcriptional repression |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 10.4 | REACTOME MYOGENESIS | Genes involved in Myogenesis |
0.3 | 9.1 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.1 | 7.9 | REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION | Genes involved in Transcriptional Regulation of White Adipocyte Differentiation |
0.0 | 7.9 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.1 | 6.0 | REACTOME HORMONE SENSITIVE LIPASE HSL MEDIATED TRIACYLGLYCEROL HYDROLYSIS | Genes involved in Hormone-sensitive lipase (HSL)-mediated triacylglycerol hydrolysis |
0.3 | 5.1 | REACTOME KERATAN SULFATE DEGRADATION | Genes involved in Keratan sulfate degradation |
0.0 | 5.1 | REACTOME CELL SURFACE INTERACTIONS AT THE VASCULAR WALL | Genes involved in Cell surface interactions at the vascular wall |
0.3 | 4.4 | REACTOME HORMONE LIGAND BINDING RECEPTORS | Genes involved in Hormone ligand-binding receptors |
0.0 | 4.4 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.1 | 4.2 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |