Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
NFKB1 | hg38_v1_chr4_+_102501298_102501474 | 0.10 | 5.9e-01 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 11.2 | GO:0048535 | lymph node development(GO:0048535) |
0.1 | 11.1 | GO:0000381 | regulation of alternative mRNA splicing, via spliceosome(GO:0000381) |
0.8 | 8.3 | GO:1990034 | calcium ion export from cell(GO:1990034) |
0.1 | 7.9 | GO:0060333 | interferon-gamma-mediated signaling pathway(GO:0060333) |
1.9 | 7.5 | GO:1990108 | protein linear deubiquitination(GO:1990108) |
0.4 | 7.5 | GO:0070424 | regulation of nucleotide-binding oligomerization domain containing signaling pathway(GO:0070424) |
0.0 | 7.1 | GO:0035335 | peptidyl-tyrosine dephosphorylation(GO:0035335) |
2.3 | 7.0 | GO:0090222 | centrosome-templated microtubule nucleation(GO:0090222) |
0.5 | 6.0 | GO:0060753 | regulation of mast cell chemotaxis(GO:0060753) |
0.1 | 5.0 | GO:1904837 | beta-catenin-TCF complex assembly(GO:1904837) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 17.4 | GO:0005802 | trans-Golgi network(GO:0005802) |
0.1 | 10.9 | GO:0031594 | neuromuscular junction(GO:0031594) |
0.4 | 8.4 | GO:0036449 | microtubule minus-end(GO:0036449) |
0.1 | 7.5 | GO:0097542 | ciliary tip(GO:0097542) |
0.0 | 6.9 | GO:0035578 | azurophil granule lumen(GO:0035578) |
0.1 | 6.1 | GO:0008180 | COP9 signalosome(GO:0008180) |
0.1 | 6.0 | GO:0030670 | phagocytic vesicle membrane(GO:0030670) |
0.0 | 6.0 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.3 | 5.9 | GO:0042613 | MHC class II protein complex(GO:0042613) |
0.5 | 5.1 | GO:0033256 | I-kappaB/NF-kappaB complex(GO:0033256) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 16.4 | GO:0005164 | tumor necrosis factor receptor binding(GO:0005164) |
0.0 | 15.7 | GO:0005525 | GTP binding(GO:0005525) |
0.0 | 14.2 | GO:0044822 | mRNA binding(GO:0003729) poly(A) RNA binding(GO:0044822) |
0.1 | 12.7 | GO:0031593 | polyubiquitin binding(GO:0031593) |
0.2 | 10.1 | GO:0043027 | cysteine-type endopeptidase inhibitor activity involved in apoptotic process(GO:0043027) |
0.4 | 8.5 | GO:0061578 | Lys63-specific deubiquitinase activity(GO:0061578) |
0.9 | 8.3 | GO:0099580 | ion antiporter activity involved in regulation of postsynaptic membrane potential(GO:0099580) |
0.3 | 7.8 | GO:0043495 | protein anchor(GO:0043495) |
0.0 | 7.8 | GO:0004725 | protein tyrosine phosphatase activity(GO:0004725) |
0.0 | 6.8 | GO:0001227 | transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 11.9 | PID NFKAPPAB CANONICAL PATHWAY | Canonical NF-kappaB pathway |
0.2 | 9.4 | ST TUMOR NECROSIS FACTOR PATHWAY | Tumor Necrosis Factor Pathway. |
0.1 | 8.9 | PID IL8 CXCR2 PATHWAY | IL8- and CXCR2-mediated signaling events |
0.2 | 8.6 | ST ERK1 ERK2 MAPK PATHWAY | ERK1/ERK2 MAPK Pathway |
0.1 | 8.5 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.2 | 5.8 | PID TCR RAS PATHWAY | Ras signaling in the CD4+ TCR pathway |
0.0 | 5.6 | PID HDAC CLASSI PATHWAY | Signaling events mediated by HDAC Class I |
0.1 | 5.5 | PID IL5 PATHWAY | IL5-mediated signaling events |
0.1 | 4.7 | PID IL2 STAT5 PATHWAY | IL2 signaling events mediated by STAT5 |
0.1 | 3.8 | PID THROMBIN PAR1 PATHWAY | PAR1-mediated thrombin signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 18.5 | REACTOME NOD1 2 SIGNALING PATHWAY | Genes involved in NOD1/2 Signaling Pathway |
0.3 | 8.9 | REACTOME IL 7 SIGNALING | Genes involved in Interleukin-7 signaling |
0.2 | 8.3 | REACTOME PLATELET CALCIUM HOMEOSTASIS | Genes involved in Platelet calcium homeostasis |
0.1 | 7.3 | REACTOME SEMA4D INDUCED CELL MIGRATION AND GROWTH CONE COLLAPSE | Genes involved in Sema4D induced cell migration and growth-cone collapse |
0.1 | 7.1 | REACTOME NOTCH1 INTRACELLULAR DOMAIN REGULATES TRANSCRIPTION | Genes involved in NOTCH1 Intracellular Domain Regulates Transcription |
0.2 | 7.0 | REACTOME ANTIGEN PRESENTATION FOLDING ASSEMBLY AND PEPTIDE LOADING OF CLASS I MHC | Genes involved in Antigen Presentation: Folding, assembly and peptide loading of class I MHC |
0.2 | 5.7 | REACTOME RIP MEDIATED NFKB ACTIVATION VIA DAI | Genes involved in RIP-mediated NFkB activation via DAI |
0.0 | 5.7 | REACTOME NRAGE SIGNALS DEATH THROUGH JNK | Genes involved in NRAGE signals death through JNK |
0.1 | 5.4 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.1 | 5.1 | REACTOME ACTIVATION OF NF KAPPAB IN B CELLS | Genes involved in Activation of NF-kappaB in B Cells |