Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
NFKB2 | hg38_v1_chr10_+_102394488_102394540 | 0.58 | 4.9e-04 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr17_-_35880350 Show fit | 7.99 |
ENST00000605140.6
ENST00000651122.1 ENST00000603197.6 |
C-C motif chemokine ligand 5 |
|
chr19_+_41877267 Show fit | 5.97 |
ENST00000221972.8
ENST00000597454.1 ENST00000444740.2 |
CD79a molecule |
|
chr15_-_88895511 Show fit | 5.74 |
ENST00000562281.1
ENST00000359595.8 ENST00000562889.5 |
hyaluronan and proteoglycan link protein 3 |
|
chr20_+_45174894 Show fit | 5.72 |
ENST00000243924.4
|
peptidase inhibitor 3 |
|
chr3_+_53161241 Show fit | 5.54 |
ENST00000477794.2
ENST00000650739.1 |
protein kinase C delta |
|
chr1_-_27635176 Show fit | 5.33 |
ENST00000374005.8
|
FGR proto-oncogene, Src family tyrosine kinase |
|
chr22_-_37244237 Show fit | 5.17 |
ENST00000401529.3
ENST00000249071.11 |
Rac family small GTPase 2 |
|
chr2_-_89010515 Show fit | 4.75 |
ENST00000493819.1
|
immunoglobulin kappa variable 1-9 |
|
chr2_-_89320146 Show fit | 4.71 |
ENST00000498574.1
|
immunoglobulin kappa variable 1-39 |
|
chr2_-_88947820 Show fit | 4.69 |
ENST00000496168.1
|
immunoglobulin kappa variable 1-5 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 23.3 | GO:0006958 | complement activation, classical pathway(GO:0006958) |
2.8 | 11.0 | GO:2000752 | regulation of phospholipid scramblase activity(GO:1900161) positive regulation of phospholipid scramblase activity(GO:1900163) regulation of glucosylceramide catabolic process(GO:2000752) positive regulation of glucosylceramide catabolic process(GO:2000753) regulation of sphingomyelin catabolic process(GO:2000754) positive regulation of sphingomyelin catabolic process(GO:2000755) |
0.8 | 9.3 | GO:0060753 | regulation of mast cell chemotaxis(GO:0060753) |
2.0 | 8.0 | GO:0033634 | positive regulation of cell-cell adhesion mediated by integrin(GO:0033634) |
0.2 | 7.0 | GO:0090023 | positive regulation of neutrophil chemotaxis(GO:0090023) |
0.0 | 6.9 | GO:0035335 | peptidyl-tyrosine dephosphorylation(GO:0035335) |
0.0 | 6.1 | GO:0008360 | regulation of cell shape(GO:0008360) |
0.7 | 5.9 | GO:0046642 | negative regulation of alpha-beta T cell proliferation(GO:0046642) |
0.0 | 5.8 | GO:0031295 | T cell costimulation(GO:0031295) |
0.4 | 5.7 | GO:2000623 | regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:2000622) negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:2000623) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 19.7 | GO:0005615 | extracellular space(GO:0005615) |
0.1 | 15.9 | GO:0072562 | blood microparticle(GO:0072562) |
0.1 | 12.5 | GO:0035578 | azurophil granule lumen(GO:0035578) |
0.1 | 10.2 | GO:0030670 | phagocytic vesicle membrane(GO:0030670) |
0.1 | 9.8 | GO:0005758 | mitochondrial intermembrane space(GO:0005758) |
0.0 | 8.2 | GO:0009898 | cytoplasmic side of plasma membrane(GO:0009898) |
0.1 | 7.1 | GO:0101003 | ficolin-1-rich granule membrane(GO:0101003) |
0.0 | 6.7 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.3 | 6.5 | GO:0042613 | MHC class II protein complex(GO:0042613) |
0.1 | 6.2 | GO:0035580 | specific granule lumen(GO:0035580) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 31.0 | GO:0003823 | antigen binding(GO:0003823) |
1.2 | 11.0 | GO:0004699 | calcium-independent protein kinase C activity(GO:0004699) |
0.0 | 10.9 | GO:0005200 | structural constituent of cytoskeleton(GO:0005200) |
0.0 | 8.9 | GO:0004725 | protein tyrosine phosphatase activity(GO:0004725) |
1.6 | 8.0 | GO:0031726 | CCR1 chemokine receptor binding(GO:0031726) |
0.9 | 7.7 | GO:0034988 | Fc-gamma receptor I complex binding(GO:0034988) |
0.4 | 7.0 | GO:0045236 | CXCR chemokine receptor binding(GO:0045236) |
0.4 | 6.5 | GO:0032395 | MHC class II receptor activity(GO:0032395) |
0.2 | 5.9 | GO:0005031 | tumor necrosis factor-activated receptor activity(GO:0005031) death receptor activity(GO:0005035) |
0.3 | 5.8 | GO:0030881 | beta-2-microglobulin binding(GO:0030881) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 20.6 | PID SYNDECAN 4 PATHWAY | Syndecan-4-mediated signaling events |
0.3 | 18.7 | PID IL8 CXCR2 PATHWAY | IL8- and CXCR2-mediated signaling events |
0.1 | 10.8 | PID IL12 2PATHWAY | IL12-mediated signaling events |
0.1 | 9.4 | PID KIT PATHWAY | Signaling events mediated by Stem cell factor receptor (c-Kit) |
0.1 | 9.1 | PID RAC1 PATHWAY | RAC1 signaling pathway |
0.3 | 7.9 | PID TCR RAS PATHWAY | Ras signaling in the CD4+ TCR pathway |
0.2 | 7.6 | ST INTERLEUKIN 4 PATHWAY | Interleukin 4 (IL-4) Pathway |
0.1 | 7.1 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.1 | 6.7 | PID BCR 5PATHWAY | BCR signaling pathway |
0.1 | 6.0 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 15.0 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
0.2 | 11.0 | REACTOME EFFECTS OF PIP2 HYDROLYSIS | Genes involved in Effects of PIP2 hydrolysis |
0.2 | 9.0 | REACTOME SEMA4D INDUCED CELL MIGRATION AND GROWTH CONE COLLAPSE | Genes involved in Sema4D induced cell migration and growth-cone collapse |
0.1 | 8.2 | REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS | Genes involved in Antigen Activates B Cell Receptor Leading to Generation of Second Messengers |
0.1 | 6.8 | REACTOME DEADENYLATION OF MRNA | Genes involved in Deadenylation of mRNA |
0.2 | 6.6 | REACTOME THROMBOXANE SIGNALLING THROUGH TP RECEPTOR | Genes involved in Thromboxane signalling through TP receptor |
0.3 | 6.5 | REACTOME TRANSLOCATION OF ZAP 70 TO IMMUNOLOGICAL SYNAPSE | Genes involved in Translocation of ZAP-70 to Immunological synapse |
0.1 | 6.4 | REACTOME LATENT INFECTION OF HOMO SAPIENS WITH MYCOBACTERIUM TUBERCULOSIS | Genes involved in Latent infection of Homo sapiens with Mycobacterium tuberculosis |
0.2 | 5.7 | REACTOME IL 7 SIGNALING | Genes involved in Interleukin-7 signaling |
0.1 | 5.7 | REACTOME ACTIVATION OF NF KAPPAB IN B CELLS | Genes involved in Activation of NF-kappaB in B Cells |