Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
NKX2-1 | hg38_v1_chr14_-_36521149_36521191 | 0.41 | 2.0e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr16_-_4242068 Show fit | 11.57 |
ENST00000399609.7
|
sarcalumenin |
|
chr10_-_73641450 Show fit | 7.79 |
ENST00000359322.5
|
myozenin 1 |
|
chr12_+_101568350 Show fit | 7.12 |
ENST00000550514.5
|
myosin binding protein C1 |
|
chr3_-_46882106 Show fit | 6.22 |
ENST00000662933.1
|
myosin light chain 3 |
|
chr3_+_121593363 Show fit | 5.30 |
ENST00000338040.6
|
F-box protein 40 |
|
chr3_-_42702820 Show fit | 5.28 |
ENST00000416756.5
|
hedgehog acyltransferase like |
|
chr2_+_167187283 Show fit | 5.03 |
ENST00000409605.1
ENST00000409273.6 |
xin actin binding repeat containing 2 |
|
chr3_-_42702778 Show fit | 5.00 |
ENST00000457462.5
ENST00000441594.6 |
hedgehog acyltransferase like |
|
chr20_+_31819348 Show fit | 4.83 |
ENST00000375985.5
|
myosin light chain kinase 2 |
|
chr20_+_31819302 Show fit | 4.74 |
ENST00000375994.6
|
myosin light chain kinase 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 15.6 | GO:0055008 | cardiac muscle tissue morphogenesis(GO:0055008) |
3.3 | 13.2 | GO:0060254 | regulation of N-terminal protein palmitoylation(GO:0060254) negative regulation of N-terminal protein palmitoylation(GO:0060262) negative regulation of protein lipidation(GO:1903060) |
2.5 | 10.1 | GO:1905229 | cellular response to glycoprotein(GO:1904588) cellular response to thyrotropin-releasing hormone(GO:1905229) |
1.4 | 9.6 | GO:0032971 | regulation of muscle filament sliding(GO:0032971) |
0.1 | 8.2 | GO:0030239 | myofibril assembly(GO:0030239) |
0.3 | 7.1 | GO:0071688 | striated muscle myosin thick filament assembly(GO:0071688) |
0.5 | 5.6 | GO:0060136 | embryonic process involved in female pregnancy(GO:0060136) |
1.5 | 4.4 | GO:0060929 | Purkinje myocyte differentiation(GO:0003168) cardiac pacemaker cell fate commitment(GO:0060927) atrioventricular node cell fate commitment(GO:0060929) |
0.0 | 4.2 | GO:0006937 | regulation of muscle contraction(GO:0006937) |
0.2 | 4.1 | GO:0071313 | cellular response to caffeine(GO:0071313) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 17.7 | GO:0030017 | sarcomere(GO:0030017) |
0.8 | 11.6 | GO:0033018 | sarcoplasmic reticulum lumen(GO:0033018) |
0.0 | 10.4 | GO:0016323 | basolateral plasma membrane(GO:0016323) |
0.1 | 10.1 | GO:0031941 | filamentous actin(GO:0031941) |
0.2 | 7.8 | GO:0031143 | pseudopodium(GO:0031143) |
0.3 | 7.1 | GO:0032982 | myosin filament(GO:0032982) |
0.2 | 6.2 | GO:0005859 | muscle myosin complex(GO:0005859) |
0.2 | 5.8 | GO:0043219 | lateral loop(GO:0043219) |
0.3 | 5.6 | GO:0044233 | ER-mitochondrion membrane contact site(GO:0044233) |
0.8 | 4.1 | GO:0014802 | terminal cisterna(GO:0014802) ryanodine receptor complex(GO:1990425) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 13.7 | GO:0005525 | GTP binding(GO:0005525) |
1.3 | 10.1 | GO:0004996 | thyroid-stimulating hormone receptor activity(GO:0004996) |
1.0 | 9.6 | GO:0004687 | myosin light chain kinase activity(GO:0004687) |
0.1 | 9.2 | GO:0051393 | alpha-actinin binding(GO:0051393) |
1.0 | 7.8 | GO:0051373 | FATZ binding(GO:0051373) |
0.3 | 7.1 | GO:0031432 | titin binding(GO:0031432) |
1.0 | 6.2 | GO:0032038 | myosin II heavy chain binding(GO:0032038) |
1.4 | 5.6 | GO:0047676 | arachidonate-CoA ligase activity(GO:0047676) |
1.1 | 4.4 | GO:0010736 | serum response element binding(GO:0010736) |
0.8 | 4.1 | GO:0048763 | calcium-induced calcium release activity(GO:0048763) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 11.7 | PID ARF6 TRAFFICKING PATHWAY | Arf6 trafficking events |
0.1 | 9.4 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.1 | 4.2 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
0.1 | 4.0 | PID INSULIN GLUCOSE PATHWAY | Insulin-mediated glucose transport |
0.1 | 3.1 | PID CIRCADIAN PATHWAY | Circadian rhythm pathway |
0.0 | 3.0 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 2.9 | PID RET PATHWAY | Signaling events regulated by Ret tyrosine kinase |
0.0 | 2.2 | PID PRL SIGNALING EVENTS PATHWAY | Signaling events mediated by PRL |
0.1 | 2.1 | PID ARF 3PATHWAY | Arf1 pathway |
0.0 | 2.0 | WNT SIGNALING | Genes related to Wnt-mediated signal transduction |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 16.0 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.6 | 9.7 | REACTOME HORMONE LIGAND BINDING RECEPTORS | Genes involved in Hormone ligand-binding receptors |
0.1 | 5.6 | REACTOME SYNTHESIS OF VERY LONG CHAIN FATTY ACYL COAS | Genes involved in Synthesis of very long-chain fatty acyl-CoAs |
0.1 | 3.8 | REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION | Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression |
0.1 | 3.3 | REACTOME TIGHT JUNCTION INTERACTIONS | Genes involved in Tight junction interactions |
0.0 | 2.9 | REACTOME VOLTAGE GATED POTASSIUM CHANNELS | Genes involved in Voltage gated Potassium channels |
0.1 | 2.7 | REACTOME BASIGIN INTERACTIONS | Genes involved in Basigin interactions |
0.1 | 2.6 | REACTOME ACYL CHAIN REMODELLING OF PS | Genes involved in Acyl chain remodelling of PS |
0.0 | 2.4 | REACTOME DARPP 32 EVENTS | Genes involved in DARPP-32 events |
0.0 | 2.3 | REACTOME SEMA4D INDUCED CELL MIGRATION AND GROWTH CONE COLLAPSE | Genes involved in Sema4D induced cell migration and growth-cone collapse |