Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
NKX2-4 | hg38_v1_chr20_-_21397513_21397531 | 0.53 | 1.9e-03 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.9 | 18.8 | GO:0035995 | detection of muscle stretch(GO:0035995) |
0.3 | 6.2 | GO:2000291 | regulation of myoblast proliferation(GO:2000291) |
0.0 | 6.1 | GO:0006501 | C-terminal protein lipidation(GO:0006501) |
0.7 | 4.4 | GO:0007341 | penetration of zona pellucida(GO:0007341) |
0.2 | 3.9 | GO:0019532 | oxalate transport(GO:0019532) |
0.9 | 3.6 | GO:1900111 | positive regulation of histone H3-K9 dimethylation(GO:1900111) |
0.1 | 3.3 | GO:0006590 | thyroid hormone generation(GO:0006590) |
0.1 | 3.2 | GO:2000766 | negative regulation of cytoplasmic translation(GO:2000766) |
0.2 | 2.9 | GO:0048739 | cardiac muscle fiber development(GO:0048739) |
0.2 | 2.4 | GO:1902897 | regulation of postsynaptic density protein 95 clustering(GO:1902897) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 45.7 | GO:0031674 | I band(GO:0031674) |
0.0 | 5.1 | GO:0031225 | anchored component of membrane(GO:0031225) |
0.3 | 3.9 | GO:0005916 | fascia adherens(GO:0005916) |
0.1 | 3.9 | GO:0005614 | interstitial matrix(GO:0005614) |
0.0 | 3.7 | GO:0016605 | PML body(GO:0016605) |
0.2 | 3.6 | GO:0001741 | XY body(GO:0001741) |
0.1 | 3.2 | GO:1990124 | messenger ribonucleoprotein complex(GO:1990124) |
0.0 | 2.7 | GO:0000922 | spindle pole(GO:0000922) |
0.0 | 2.2 | GO:0099501 | synaptic vesicle membrane(GO:0030672) exocytic vesicle membrane(GO:0099501) |
0.1 | 1.9 | GO:0005890 | sodium:potassium-exchanging ATPase complex(GO:0005890) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.2 | 21.3 | GO:0031433 | telethonin binding(GO:0031433) |
2.1 | 6.2 | GO:0061629 | RNA polymerase II sequence-specific DNA binding transcription factor binding(GO:0061629) |
0.0 | 5.0 | GO:0051087 | chaperone binding(GO:0051087) |
0.2 | 3.9 | GO:0019531 | oxalate transmembrane transporter activity(GO:0019531) |
0.0 | 3.8 | GO:0008565 | protein transporter activity(GO:0008565) |
0.0 | 3.8 | GO:0005539 | glycosaminoglycan binding(GO:0005539) |
0.1 | 3.5 | GO:0051393 | alpha-actinin binding(GO:0051393) |
0.7 | 3.3 | GO:0004447 | iodide peroxidase activity(GO:0004447) |
0.1 | 3.2 | GO:0000900 | translation repressor activity, nucleic acid binding(GO:0000900) |
0.1 | 3.0 | GO:0051371 | muscle alpha-actinin binding(GO:0051371) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.0 | PID P38 MK2 PATHWAY | p38 signaling mediated by MAPKAP kinases |
0.0 | 2.7 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.0 | 2.6 | PID AURORA B PATHWAY | Aurora B signaling |
0.0 | 2.5 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
0.0 | 2.3 | PID LIS1 PATHWAY | Lissencephaly gene (LIS1) in neuronal migration and development |
0.0 | 2.1 | PID MAPK TRK PATHWAY | Trk receptor signaling mediated by the MAPK pathway |
0.0 | 2.1 | PID ERBB1 INTERNALIZATION PATHWAY | Internalization of ErbB1 |
0.0 | 1.8 | PID IL5 PATHWAY | IL5-mediated signaling events |
0.1 | 1.7 | PID RANBP2 PATHWAY | Sumoylation by RanBP2 regulates transcriptional repression |
0.0 | 1.7 | PID HIF1A PATHWAY | Hypoxic and oxygen homeostasis regulation of HIF-1-alpha |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.0 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.1 | 3.3 | REACTOME AMINE DERIVED HORMONES | Genes involved in Amine-derived hormones |
0.1 | 3.1 | REACTOME REGULATION OF HYPOXIA INDUCIBLE FACTOR HIF BY OXYGEN | Genes involved in Regulation of Hypoxia-inducible Factor (HIF) by Oxygen |
0.0 | 3.1 | REACTOME NUCLEAR EVENTS KINASE AND TRANSCRIPTION FACTOR ACTIVATION | Genes involved in Nuclear Events (kinase and transcription factor activation) |
0.0 | 2.2 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
0.1 | 2.0 | REACTOME NEF MEDIATED DOWNREGULATION OF MHC CLASS I COMPLEX CELL SURFACE EXPRESSION | Genes involved in Nef mediated downregulation of MHC class I complex cell surface expression |
0.0 | 2.0 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.0 | 1.5 | REACTOME SEMA4D INDUCED CELL MIGRATION AND GROWTH CONE COLLAPSE | Genes involved in Sema4D induced cell migration and growth-cone collapse |
0.0 | 1.5 | REACTOME GLYCOLYSIS | Genes involved in Glycolysis |
0.0 | 1.4 | REACTOME SIGNALING BY CONSTITUTIVELY ACTIVE EGFR | Genes involved in Signaling by constitutively active EGFR |