Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
NKX2-6 | hg38_v1_chr8_-_23706756_23706756 | -0.14 | 4.6e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr7_+_142791635 Show fit | 7.00 |
ENST00000633705.1
|
T cell receptor beta constant 1 |
|
chr7_+_142800957 Show fit | 6.87 |
ENST00000466254.1
|
T cell receptor beta constant 2 |
|
chr14_-_106579223 Show fit | 6.50 |
ENST00000390626.2
|
immunoglobulin heavy variable 5-51 |
|
chr14_+_22320128 Show fit | 5.06 |
ENST00000390468.1
|
T cell receptor alpha variable 41 |
|
chr19_+_3178756 Show fit | 4.32 |
ENST00000246115.5
|
sphingosine-1-phosphate receptor 4 |
|
chr22_+_22887780 Show fit | 4.29 |
ENST00000532223.2
ENST00000526893.6 ENST00000531372.1 |
immunoglobulin lambda like polypeptide 5 |
|
chr6_-_159044980 Show fit | 4.26 |
ENST00000367066.8
|
T cell activation RhoGTPase activating protein |
|
chr6_-_159045104 Show fit | 4.22 |
ENST00000326965.7
|
T cell activation RhoGTPase activating protein |
|
chr22_-_37486357 Show fit | 4.20 |
ENST00000356998.8
ENST00000416983.7 ENST00000424765.2 |
MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase |
|
chr6_-_159045010 Show fit | 4.08 |
ENST00000338313.5
|
T cell activation RhoGTPase activating protein |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 34.6 | GO:0006910 | phagocytosis, recognition(GO:0006910) |
0.0 | 13.9 | GO:0051056 | regulation of small GTPase mediated signal transduction(GO:0051056) |
0.0 | 8.6 | GO:0038096 | immune response-regulating cell surface receptor signaling pathway involved in phagocytosis(GO:0002433) Fc-gamma receptor signaling pathway involved in phagocytosis(GO:0038096) |
0.0 | 8.2 | GO:0031532 | actin cytoskeleton reorganization(GO:0031532) |
0.8 | 5.4 | GO:2000814 | regulation of unidimensional cell growth(GO:0051510) negative regulation of unidimensional cell growth(GO:0051511) establishment of cell polarity regulating cell shape(GO:0071964) regulation of establishment or maintenance of cell polarity regulating cell shape(GO:2000769) positive regulation of establishment or maintenance of cell polarity regulating cell shape(GO:2000771) regulation of establishment of cell polarity regulating cell shape(GO:2000782) positive regulation of establishment of cell polarity regulating cell shape(GO:2000784) positive regulation of barbed-end actin filament capping(GO:2000814) |
1.6 | 4.7 | GO:0002665 | negative regulation of T cell tolerance induction(GO:0002665) negative regulation of T cell anergy(GO:0002668) negative regulation of lymphocyte anergy(GO:0002912) regulation of lymphotoxin A production(GO:0032681) positive regulation of lymphotoxin A production(GO:0032761) regulation of lymphotoxin A biosynthetic process(GO:0043016) positive regulation of lymphotoxin A biosynthetic process(GO:0043017) |
0.2 | 4.5 | GO:0070493 | thrombin receptor signaling pathway(GO:0070493) |
0.3 | 4.4 | GO:0002315 | marginal zone B cell differentiation(GO:0002315) |
0.2 | 4.3 | GO:0003376 | sphingosine-1-phosphate signaling pathway(GO:0003376) |
0.2 | 4.1 | GO:0047484 | regulation of response to osmotic stress(GO:0047484) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 34.6 | GO:0042571 | immunoglobulin complex, circulating(GO:0042571) |
0.0 | 10.2 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.0 | 7.0 | GO:0016607 | nuclear speck(GO:0016607) |
0.3 | 6.2 | GO:0042613 | MHC class II protein complex(GO:0042613) |
0.1 | 4.8 | GO:0001917 | photoreceptor inner segment(GO:0001917) |
0.0 | 4.6 | GO:0005667 | transcription factor complex(GO:0005667) |
0.1 | 4.5 | GO:0031362 | anchored component of external side of plasma membrane(GO:0031362) |
0.1 | 4.2 | GO:0030173 | integral component of Golgi membrane(GO:0030173) |
0.0 | 3.9 | GO:0090575 | RNA polymerase II transcription factor complex(GO:0090575) |
0.0 | 3.5 | GO:0101003 | ficolin-1-rich granule membrane(GO:0101003) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 34.6 | GO:0034987 | immunoglobulin receptor binding(GO:0034987) |
0.0 | 12.8 | GO:0005096 | GTPase activator activity(GO:0005096) |
0.4 | 6.2 | GO:0032395 | MHC class II receptor activity(GO:0032395) |
0.0 | 5.4 | GO:1902936 | phosphatidylinositol bisphosphate binding(GO:1902936) |
0.2 | 5.0 | GO:0005522 | profilin binding(GO:0005522) |
0.1 | 4.7 | GO:0015026 | coreceptor activity(GO:0015026) |
0.0 | 4.6 | GO:0003823 | antigen binding(GO:0003823) |
0.5 | 4.5 | GO:0015057 | thrombin receptor activity(GO:0015057) |
0.0 | 4.4 | GO:0001078 | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078) |
0.3 | 4.3 | GO:0038036 | sphingosine-1-phosphate receptor activity(GO:0038036) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 9.1 | PID FCER1 PATHWAY | Fc-epsilon receptor I signaling in mast cells |
0.1 | 8.9 | PID IL12 STAT4 PATHWAY | IL12 signaling mediated by STAT4 |
0.1 | 7.4 | PID ILK PATHWAY | Integrin-linked kinase signaling |
0.2 | 5.4 | SA G1 AND S PHASES | Cdk2, 4, and 6 bind cyclin D in G1, while cdk2/cyclin E promotes the G1/S transition. |
0.1 | 5.4 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.0 | 4.9 | PID RHOA REG PATHWAY | Regulation of RhoA activity |
0.1 | 4.5 | PID ENDOTHELIN PATHWAY | Endothelins |
0.1 | 4.3 | PID S1P S1P4 PATHWAY | S1P4 pathway |
0.0 | 4.1 | PID TELOMERASE PATHWAY | Regulation of Telomerase |
0.1 | 3.4 | PID AVB3 OPN PATHWAY | Osteopontin-mediated events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 18.9 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.2 | 5.4 | REACTOME SEMA3A PAK DEPENDENT AXON REPULSION | Genes involved in Sema3A PAK dependent Axon repulsion |
0.2 | 4.7 | REACTOME CD28 DEPENDENT VAV1 PATHWAY | Genes involved in CD28 dependent Vav1 pathway |
0.1 | 4.7 | REACTOME PRE NOTCH PROCESSING IN GOLGI | Genes involved in Pre-NOTCH Processing in Golgi |
0.2 | 4.5 | REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN | Genes involved in Platelet Adhesion to exposed collagen |
0.0 | 4.3 | REACTOME IMMUNOREGULATORY INTERACTIONS BETWEEN A LYMPHOID AND A NON LYMPHOID CELL | Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell |
0.0 | 3.5 | REACTOME REGULATION OF INSULIN SECRETION BY GLUCAGON LIKE PEPTIDE1 | Genes involved in Regulation of Insulin Secretion by Glucagon-like Peptide-1 |
0.1 | 3.4 | REACTOME PURINE SALVAGE | Genes involved in Purine salvage |
0.0 | 2.9 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
0.1 | 2.8 | REACTOME EICOSANOID LIGAND BINDING RECEPTORS | Genes involved in Eicosanoid ligand-binding receptors |