Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
NKX3-2 | hg38_v1_chr4_-_13544506_13544513 | -0.10 | 5.8e-01 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 13.6 | GO:0006910 | phagocytosis, recognition(GO:0006910) |
0.0 | 4.1 | GO:0016266 | O-glycan processing(GO:0016266) |
0.0 | 4.0 | GO:0031295 | T cell costimulation(GO:0031295) |
0.4 | 3.1 | GO:0038172 | interleukin-33-mediated signaling pathway(GO:0038172) |
0.1 | 3.0 | GO:0001580 | detection of chemical stimulus involved in sensory perception of bitter taste(GO:0001580) |
0.1 | 2.9 | GO:0098915 | membrane repolarization during ventricular cardiac muscle cell action potential(GO:0098915) |
0.0 | 2.8 | GO:0007585 | respiratory gaseous exchange(GO:0007585) |
0.9 | 2.7 | GO:0051041 | positive regulation of calcium-independent cell-cell adhesion(GO:0051041) |
0.9 | 2.6 | GO:0016107 | sesquiterpenoid metabolic process(GO:0006714) sesquiterpenoid catabolic process(GO:0016107) farnesol metabolic process(GO:0016487) farnesol catabolic process(GO:0016488) regulation of testosterone biosynthetic process(GO:2000224) |
0.0 | 2.6 | GO:0006958 | complement activation, classical pathway(GO:0006958) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 12.4 | GO:0042571 | immunoglobulin complex, circulating(GO:0042571) |
0.4 | 5.4 | GO:0097486 | multivesicular body lumen(GO:0097486) |
0.3 | 5.3 | GO:0042613 | MHC class II protein complex(GO:0042613) |
0.0 | 4.2 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.0 | 3.0 | GO:0005796 | Golgi lumen(GO:0005796) |
0.3 | 2.9 | GO:0008282 | ATP-sensitive potassium channel complex(GO:0008282) |
0.2 | 2.9 | GO:0005587 | collagen type IV trimer(GO:0005587) |
0.0 | 2.4 | GO:0005913 | cell-cell adherens junction(GO:0005913) |
0.2 | 2.1 | GO:0061689 | tricellular tight junction(GO:0061689) |
0.0 | 2.1 | GO:0035580 | specific granule lumen(GO:0035580) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 12.4 | GO:0034987 | immunoglobulin receptor binding(GO:0034987) |
0.0 | 4.3 | GO:0005518 | collagen binding(GO:0005518) |
0.2 | 4.0 | GO:0008320 | protein transmembrane transporter activity(GO:0008320) |
0.0 | 3.7 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.2 | 3.5 | GO:0032395 | MHC class II receptor activity(GO:0032395) |
0.0 | 3.3 | GO:0003823 | antigen binding(GO:0003823) |
1.0 | 3.1 | GO:0002113 | interleukin-33 binding(GO:0002113) |
0.0 | 3.0 | GO:0004896 | cytokine receptor activity(GO:0004896) |
0.5 | 2.9 | GO:0017098 | sulfonylurea receptor binding(GO:0017098) |
0.9 | 2.7 | GO:0031737 | CX3C chemokine receptor binding(GO:0031737) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 9.9 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 6.8 | PID P53 DOWNSTREAM PATHWAY | Direct p53 effectors |
0.0 | 3.4 | NABA BASEMENT MEMBRANES | Genes encoding structural components of basement membranes |
0.0 | 2.7 | PID HES HEY PATHWAY | Notch-mediated HES/HEY network |
0.0 | 2.6 | PID IL12 STAT4 PATHWAY | IL12 signaling mediated by STAT4 |
0.0 | 2.2 | PID ECADHERIN STABILIZATION PATHWAY | Stabilization and expansion of the E-cadherin adherens junction |
0.1 | 1.9 | PID THROMBIN PAR4 PATHWAY | PAR4-mediated thrombin signaling events |
0.0 | 1.8 | PID SMAD2 3NUCLEAR PATHWAY | Regulation of nuclear SMAD2/3 signaling |
0.0 | 1.7 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.0 | 1.6 | SA B CELL RECEPTOR COMPLEXES | Antigen binding to B cell receptors activates protein tyrosine kinases, such as the Src family, which ultimate activate MAP kinases. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.8 | REACTOME INWARDLY RECTIFYING K CHANNELS | Genes involved in Inwardly rectifying K+ channels |
0.1 | 3.6 | REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS | Genes involved in Termination of O-glycan biosynthesis |
0.0 | 2.8 | REACTOME EXTRACELLULAR MATRIX ORGANIZATION | Genes involved in Extracellular matrix organization |
0.0 | 2.7 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
0.1 | 1.9 | REACTOME THROMBIN SIGNALLING THROUGH PROTEINASE ACTIVATED RECEPTORS PARS | Genes involved in Thrombin signalling through proteinase activated receptors (PARs) |
0.0 | 1.9 | REACTOME DEGRADATION OF THE EXTRACELLULAR MATRIX | Genes involved in Degradation of the extracellular matrix |
0.0 | 1.8 | REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS | Genes involved in Antigen Activates B Cell Receptor Leading to Generation of Second Messengers |
0.0 | 1.7 | REACTOME SULFUR AMINO ACID METABOLISM | Genes involved in Sulfur amino acid metabolism |
0.0 | 1.6 | REACTOME SMAD2 SMAD3 SMAD4 HETEROTRIMER REGULATES TRANSCRIPTION | Genes involved in SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription |
0.0 | 1.3 | REACTOME OXYGEN DEPENDENT PROLINE HYDROXYLATION OF HYPOXIA INDUCIBLE FACTOR ALPHA | Genes involved in Oxygen-dependent Proline Hydroxylation of Hypoxia-inducible Factor Alpha |