Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
NR1H4 | hg38_v1_chr12_+_100473708_100473874 | -0.41 | 2.1e-02 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 3.8 | GO:0008626 | granzyme-mediated apoptotic signaling pathway(GO:0008626) |
1.1 | 3.3 | GO:0002432 | granuloma formation(GO:0002432) |
1.0 | 3.1 | GO:0002728 | negative regulation of natural killer cell cytokine production(GO:0002728) |
0.9 | 2.8 | GO:0002752 | cell surface pattern recognition receptor signaling pathway(GO:0002752) |
0.0 | 2.7 | GO:0009301 | snRNA transcription(GO:0009301) snRNA transcription from RNA polymerase II promoter(GO:0042795) |
0.4 | 2.6 | GO:0002727 | natural killer cell cytokine production(GO:0002370) regulation of natural killer cell cytokine production(GO:0002727) positive regulation of natural killer cell cytokine production(GO:0002729) |
0.4 | 2.6 | GO:0090038 | negative regulation of protein kinase C signaling(GO:0090038) |
0.0 | 2.4 | GO:0006305 | DNA alkylation(GO:0006305) DNA methylation(GO:0006306) |
0.1 | 2.3 | GO:0051014 | actin filament severing(GO:0051014) |
0.2 | 2.1 | GO:0002679 | respiratory burst involved in defense response(GO:0002679) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.8 | GO:0001772 | immunological synapse(GO:0001772) |
0.0 | 3.7 | GO:0030864 | cortical actin cytoskeleton(GO:0030864) |
0.2 | 3.3 | GO:0033093 | Weibel-Palade body(GO:0033093) |
0.0 | 3.0 | GO:0032587 | ruffle membrane(GO:0032587) |
0.4 | 2.8 | GO:0031232 | extrinsic component of external side of plasma membrane(GO:0031232) |
0.4 | 2.7 | GO:0070876 | SOSS complex(GO:0070876) |
0.1 | 2.6 | GO:0090545 | NuRD complex(GO:0016581) CHD-type complex(GO:0090545) |
0.0 | 2.6 | GO:0005913 | cell-cell adherens junction(GO:0005913) |
0.1 | 2.3 | GO:0032059 | bleb(GO:0032059) |
0.0 | 1.6 | GO:0005719 | nuclear euchromatin(GO:0005719) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.8 | GO:0051219 | phosphoprotein binding(GO:0051219) |
0.0 | 3.9 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.0 | 3.4 | GO:0017137 | Rab GTPase binding(GO:0017137) |
0.2 | 2.9 | GO:0033691 | sialic acid binding(GO:0033691) |
0.1 | 2.3 | GO:0005522 | profilin binding(GO:0005522) |
0.0 | 2.1 | GO:0003697 | single-stranded DNA binding(GO:0003697) |
0.1 | 1.6 | GO:0019992 | diacylglycerol binding(GO:0019992) |
0.1 | 1.5 | GO:0046625 | sphingolipid binding(GO:0046625) |
0.0 | 1.5 | GO:0005092 | GDP-dissociation inhibitor activity(GO:0005092) |
0.1 | 1.4 | GO:0048406 | nerve growth factor binding(GO:0048406) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.9 | SA CASPASE CASCADE | Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade. |
0.0 | 2.9 | PID BCR 5PATHWAY | BCR signaling pathway |
0.0 | 2.6 | PID HDAC CLASSI PATHWAY | Signaling events mediated by HDAC Class I |
0.0 | 2.3 | PID IL8 CXCR1 PATHWAY | IL8- and CXCR1-mediated signaling events |
0.0 | 1.6 | PID RAS PATHWAY | Regulation of Ras family activation |
0.0 | 1.6 | PID LYMPH ANGIOGENESIS PATHWAY | VEGFR3 signaling in lymphatic endothelium |
0.0 | 1.5 | PID SYNDECAN 2 PATHWAY | Syndecan-2-mediated signaling events |
0.0 | 1.5 | PID RHOA REG PATHWAY | Regulation of RhoA activity |
0.0 | 1.4 | SA MMP CYTOKINE CONNECTION | Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix. |
0.0 | 1.3 | SA FAS SIGNALING | The TNF-type receptor Fas induces apoptosis on ligand binding. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.7 | REACTOME IMMUNOREGULATORY INTERACTIONS BETWEEN A LYMPHOID AND A NON LYMPHOID CELL | Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell |
0.1 | 4.2 | REACTOME INTRINSIC PATHWAY FOR APOPTOSIS | Genes involved in Intrinsic Pathway for Apoptosis |
0.1 | 2.5 | REACTOME REGULATION OF SIGNALING BY CBL | Genes involved in Regulation of signaling by CBL |
0.1 | 1.8 | REACTOME CALNEXIN CALRETICULIN CYCLE | Genes involved in Calnexin/calreticulin cycle |
0.0 | 1.6 | REACTOME RAP1 SIGNALLING | Genes involved in Rap1 signalling |
0.0 | 1.4 | REACTOME NRAGE SIGNALS DEATH THROUGH JNK | Genes involved in NRAGE signals death through JNK |
0.0 | 1.3 | REACTOME SEMA3A PAK DEPENDENT AXON REPULSION | Genes involved in Sema3A PAK dependent Axon repulsion |
0.0 | 1.2 | REACTOME REGULATION OF GENE EXPRESSION IN BETA CELLS | Genes involved in Regulation of gene expression in beta cells |
0.0 | 1.2 | REACTOME ERK MAPK TARGETS | Genes involved in ERK/MAPK targets |
0.1 | 0.8 | REACTOME BINDING AND ENTRY OF HIV VIRION | Genes involved in Binding and entry of HIV virion |