Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
NR2C1 | hg38_v1_chr12_-_95073580_95073641 | -0.33 | 6.5e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_-_229434086 Show fit | 11.97 |
ENST00000366684.7
ENST00000684723.1 ENST00000366683.4 |
actin alpha 1, skeletal muscle |
|
chr17_+_39665340 Show fit | 8.69 |
ENST00000578283.1
ENST00000309889.3 |
titin-cap |
|
chr16_-_4242068 Show fit | 6.20 |
ENST00000399609.7
|
sarcalumenin |
|
chr1_-_982086 Show fit | 5.46 |
ENST00000341290.6
|
PPARGC1 and ESRR induced regulator, muscle 1 |
|
chr17_+_4950147 Show fit | 4.83 |
ENST00000522301.5
|
enolase 3 |
|
chr12_+_48106094 Show fit | 4.80 |
ENST00000546755.5
ENST00000549366.5 ENST00000642730.1 ENST00000552792.5 |
phosphofructokinase, muscle |
|
chr14_+_104745960 Show fit | 4.74 |
ENST00000556623.1
ENST00000555674.1 |
adenylosuccinate synthase 1 |
|
chr6_-_159727324 Show fit | 4.57 |
ENST00000401980.3
ENST00000545162.5 |
superoxide dismutase 2 |
|
chr19_+_16661121 Show fit | 4.44 |
ENST00000187762.7
ENST00000599479.1 |
transmembrane protein 38A |
|
chr6_-_159726871 Show fit | 4.39 |
ENST00000535561.5
|
superoxide dismutase 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.0 | 12.0 | GO:0090131 | mesenchyme migration(GO:0090131) |
1.8 | 9.0 | GO:0001315 | age-dependent response to oxidative stress(GO:0001306) age-dependent response to reactive oxygen species(GO:0001315) regulation of systemic arterial blood pressure by acetylcholine(GO:0003068) vasodilation by acetylcholine involved in regulation of systemic arterial blood pressure(GO:0003069) regulation of systemic arterial blood pressure by neurotransmitter(GO:0003070) age-dependent general metabolic decline(GO:0007571) |
1.1 | 8.7 | GO:0030241 | skeletal muscle myosin thick filament assembly(GO:0030241) |
0.8 | 5.5 | GO:0006196 | AMP catabolic process(GO:0006196) |
0.1 | 5.5 | GO:0014850 | response to muscle activity(GO:0014850) |
0.1 | 4.9 | GO:0000042 | protein targeting to Golgi(GO:0000042) |
0.8 | 4.8 | GO:0093001 | glycolysis from storage polysaccharide through glucose-1-phosphate(GO:0093001) |
0.1 | 4.8 | GO:0043403 | skeletal muscle tissue regeneration(GO:0043403) |
0.5 | 3.9 | GO:2001293 | malonyl-CoA metabolic process(GO:2001293) |
1.2 | 3.7 | GO:1903280 | negative regulation of calcium:sodium antiporter activity(GO:1903280) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 15.6 | GO:0005865 | striated muscle thin filament(GO:0005865) |
0.0 | 10.2 | GO:0005759 | mitochondrial matrix(GO:0005759) |
0.0 | 9.3 | GO:0030018 | Z disc(GO:0030018) |
0.4 | 6.2 | GO:0033018 | sarcoplasmic reticulum lumen(GO:0033018) |
0.7 | 4.8 | GO:0005945 | 6-phosphofructokinase complex(GO:0005945) |
0.4 | 4.8 | GO:0000015 | phosphopyruvate hydratase complex(GO:0000015) |
0.1 | 4.4 | GO:0033017 | sarcoplasmic reticulum membrane(GO:0033017) |
0.0 | 4.3 | GO:0101002 | ficolin-1-rich granule(GO:0101002) ficolin-1-rich granule lumen(GO:1904813) |
0.0 | 3.9 | GO:0005903 | brush border(GO:0005903) |
0.0 | 3.8 | GO:0005802 | trans-Golgi network(GO:0005802) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 12.0 | GO:0043531 | ADP binding(GO:0043531) |
0.9 | 9.0 | GO:0004784 | superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721) |
1.1 | 8.7 | GO:0051373 | FATZ binding(GO:0051373) |
0.0 | 6.0 | GO:0008307 | structural constituent of muscle(GO:0008307) |
0.5 | 5.5 | GO:0047623 | AMP deaminase activity(GO:0003876) adenosine-phosphate deaminase activity(GO:0047623) |
0.5 | 4.8 | GO:0003872 | 6-phosphofructokinase activity(GO:0003872) |
0.4 | 4.8 | GO:0004634 | phosphopyruvate hydratase activity(GO:0004634) |
0.1 | 4.4 | GO:0015269 | calcium-activated potassium channel activity(GO:0015269) |
0.2 | 3.7 | GO:1990239 | steroid hormone binding(GO:1990239) |
0.2 | 3.1 | GO:0004445 | inositol-polyphosphate 5-phosphatase activity(GO:0004445) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 11.7 | PID RHOA PATHWAY | RhoA signaling pathway |
0.1 | 7.6 | PID FOXO PATHWAY | FoxO family signaling |
0.0 | 4.8 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.1 | 3.4 | ST GAQ PATHWAY | G alpha q Pathway |
0.0 | 1.7 | PID LKB1 PATHWAY | LKB1 signaling events |
0.0 | 1.5 | PID CERAMIDE PATHWAY | Ceramide signaling pathway |
0.1 | 1.0 | PID VEGF VEGFR PATHWAY | VEGF and VEGFR signaling network |
0.0 | 0.9 | PID RETINOIC ACID PATHWAY | Retinoic acid receptors-mediated signaling |
0.0 | 0.5 | PID MET PATHWAY | Signaling events mediated by Hepatocyte Growth Factor Receptor (c-Met) |
0.0 | 0.4 | PID P38 MKK3 6PATHWAY | p38 MAPK signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 12.3 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.1 | 9.6 | REACTOME GLYCOLYSIS | Genes involved in Glycolysis |
0.2 | 5.5 | REACTOME PURINE SALVAGE | Genes involved in Purine salvage |
0.1 | 4.3 | REACTOME ACTIVATED AMPK STIMULATES FATTY ACID OXIDATION IN MUSCLE | Genes involved in Activated AMPK stimulates fatty-acid oxidation in muscle |
0.1 | 4.1 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.0 | 4.1 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
0.1 | 3.2 | REACTOME SIGNALING BY HIPPO | Genes involved in Signaling by Hippo |
0.0 | 3.1 | REACTOME SYNTHESIS OF PIPS AT THE PLASMA MEMBRANE | Genes involved in Synthesis of PIPs at the plasma membrane |
0.1 | 2.2 | REACTOME PASSIVE TRANSPORT BY AQUAPORINS | Genes involved in Passive Transport by Aquaporins |
0.1 | 2.1 | REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS | Genes involved in Caspase-mediated cleavage of cytoskeletal proteins |