Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
NR2E1 | hg38_v1_chr6_+_108166015_108166034 | -0.43 | 1.4e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr7_+_116526277 Show fit | 2.09 |
ENST00000393468.1
ENST00000393467.1 |
caveolin 1 |
|
chr6_-_46954922 Show fit | 2.03 |
ENST00000265417.7
|
adhesion G protein-coupled receptor F5 |
|
chr3_-_64687613 Show fit | 1.64 |
ENST00000295903.8
|
ADAM metallopeptidase with thrombospondin type 1 motif 9 |
|
chr1_+_185734362 Show fit | 1.63 |
ENST00000271588.9
|
hemicentin 1 |
|
chr1_+_31576485 Show fit | 1.50 |
ENST00000457433.6
ENST00000271064.12 |
tubulointerstitial nephritis antigen like 1 |
|
chr3_-_64687992 Show fit | 1.46 |
ENST00000498707.5
|
ADAM metallopeptidase with thrombospondin type 1 motif 9 |
|
chr2_+_191276885 Show fit | 1.43 |
ENST00000392316.5
|
myosin IB |
|
chr2_-_89143133 Show fit | 1.41 |
ENST00000492167.1
|
immunoglobulin kappa variable 3-20 |
|
chr11_-_5254741 Show fit | 1.40 |
ENST00000444587.1
ENST00000336906.6 ENST00000642908.1 ENST00000647543.1 |
hemoglobin subunit gamma 2 novel protein |
|
chr3_-_64687982 Show fit | 1.28 |
ENST00000459780.1
|
ADAM metallopeptidase with thrombospondin type 1 motif 9 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 4.9 | GO:0006957 | complement activation, alternative pathway(GO:0006957) |
0.2 | 4.4 | GO:0045636 | positive regulation of melanocyte differentiation(GO:0045636) |
0.4 | 2.4 | GO:1902202 | regulation of hepatocyte growth factor receptor signaling pathway(GO:1902202) |
0.3 | 2.3 | GO:0070171 | negative regulation of tooth mineralization(GO:0070171) |
0.5 | 2.1 | GO:1903609 | negative regulation of peptidyl-tyrosine autophosphorylation(GO:1900085) negative regulation of inward rectifier potassium channel activity(GO:1903609) |
0.2 | 2.1 | GO:0071073 | positive regulation of phospholipid biosynthetic process(GO:0071073) |
0.1 | 2.1 | GO:0015671 | oxygen transport(GO:0015671) |
0.3 | 2.0 | GO:0070295 | renal water absorption(GO:0070295) |
0.1 | 2.0 | GO:0043152 | induction of bacterial agglutination(GO:0043152) |
0.1 | 2.0 | GO:0002158 | osteoclast proliferation(GO:0002158) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 12.4 | GO:0005578 | proteinaceous extracellular matrix(GO:0005578) |
0.1 | 2.1 | GO:0005833 | hemoglobin complex(GO:0005833) |
0.1 | 2.1 | GO:0034098 | VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098) |
0.1 | 2.0 | GO:0042589 | zymogen granule membrane(GO:0042589) |
0.1 | 1.8 | GO:0097136 | Bcl-2 family protein complex(GO:0097136) |
0.0 | 1.6 | GO:0016459 | myosin complex(GO:0016459) |
0.1 | 1.5 | GO:0098647 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
0.1 | 1.5 | GO:0097512 | cardiac myofibril(GO:0097512) |
0.3 | 1.4 | GO:0071753 | IgM immunoglobulin complex(GO:0071753) IgM immunoglobulin complex, circulating(GO:0071754) pentameric IgM immunoglobulin complex(GO:0071756) |
0.0 | 1.1 | GO:0005614 | interstitial matrix(GO:0005614) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 7.8 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
0.0 | 5.2 | GO:0005518 | collagen binding(GO:0005518) |
0.0 | 3.8 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.5 | 2.1 | GO:0070320 | inward rectifier potassium channel inhibitor activity(GO:0070320) |
0.1 | 2.1 | GO:0005344 | oxygen transporter activity(GO:0005344) |
0.7 | 2.0 | GO:0035375 | zymogen binding(GO:0035375) |
0.3 | 2.0 | GO:0016941 | natriuretic peptide receptor activity(GO:0016941) |
0.1 | 1.8 | GO:0051434 | BH3 domain binding(GO:0051434) |
0.1 | 1.7 | GO:0030247 | pattern binding(GO:0001871) polysaccharide binding(GO:0030247) |
0.1 | 1.6 | GO:0030898 | actin-dependent ATPase activity(GO:0030898) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 9.7 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.1 | 4.2 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 3.9 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.0 | 3.8 | PID AP1 PATHWAY | AP-1 transcription factor network |
0.0 | 2.6 | NABA BASEMENT MEMBRANES | Genes encoding structural components of basement membranes |
0.0 | 2.1 | PID WNT CANONICAL PATHWAY | Canonical Wnt signaling pathway |
0.0 | 2.1 | PID P38 ALPHA BETA DOWNSTREAM PATHWAY | Signaling mediated by p38-alpha and p38-beta |
0.0 | 1.9 | PID WNT NONCANONICAL PATHWAY | Noncanonical Wnt signaling pathway |
0.1 | 1.8 | SA PROGRAMMED CELL DEATH | Programmed cell death, or apoptosis, eliminates damaged or unneeded cells. |
0.0 | 1.4 | PID ATF2 PATHWAY | ATF-2 transcription factor network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.9 | REACTOME HYALURONAN METABOLISM | Genes involved in Hyaluronan metabolism |
0.1 | 2.1 | REACTOME ENOS ACTIVATION AND REGULATION | Genes involved in eNOS activation and regulation |
0.0 | 2.1 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.0 | 1.8 | REACTOME INFLAMMASOMES | Genes involved in Inflammasomes |
0.1 | 1.7 | REACTOME INITIAL TRIGGERING OF COMPLEMENT | Genes involved in Initial triggering of complement |
0.0 | 1.7 | REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS | Genes involved in Class B/2 (Secretin family receptors) |
0.1 | 1.5 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.0 | 1.2 | REACTOME AMYLOIDS | Genes involved in Amyloids |
0.1 | 1.0 | REACTOME CALNEXIN CALRETICULIN CYCLE | Genes involved in Calnexin/calreticulin cycle |
0.0 | 1.0 | REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT | Genes involved in ABC-family proteins mediated transport |