Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
NR4A2 | hg38_v1_chr2_-_156342348_156342466 | -0.41 | 1.9e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_+_236686454 Show fit | 11.70 |
ENST00000542672.6
ENST00000366578.6 ENST00000682015.1 ENST00000651275.1 |
actinin alpha 2 |
|
chr1_-_229434086 Show fit | 5.72 |
ENST00000366684.7
ENST00000684723.1 ENST00000366683.4 |
actin alpha 1, skeletal muscle |
|
chr3_-_42702778 Show fit | 5.13 |
ENST00000457462.5
ENST00000441594.6 |
hedgehog acyltransferase like |
|
chr3_-_42701513 Show fit | 4.14 |
ENST00000310417.9
|
hedgehog acyltransferase like |
|
chr16_-_4242068 Show fit | 3.58 |
ENST00000399609.7
|
sarcalumenin |
|
chr3_-_42702820 Show fit | 3.40 |
ENST00000416756.5
|
hedgehog acyltransferase like |
|
chrX_-_21758097 Show fit | 3.19 |
ENST00000379494.4
|
small muscle protein X-linked |
|
chr3_-_42702638 Show fit | 3.18 |
ENST00000417472.5
ENST00000442469.1 |
hedgehog acyltransferase like |
|
chr11_-_111923722 Show fit | 2.94 |
ENST00000527950.5
|
crystallin alpha B |
|
chrX_-_21758021 Show fit | 2.89 |
ENST00000646008.1
|
small muscle protein X-linked |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
4.0 | 15.8 | GO:1903060 | regulation of N-terminal protein palmitoylation(GO:0060254) negative regulation of N-terminal protein palmitoylation(GO:0060262) negative regulation of protein lipidation(GO:1903060) |
3.9 | 11.7 | GO:0051695 | actin filament uncapping(GO:0051695) |
0.1 | 6.0 | GO:0006120 | mitochondrial electron transport, NADH to ubiquinone(GO:0006120) |
0.7 | 5.9 | GO:0010961 | cellular magnesium ion homeostasis(GO:0010961) |
1.0 | 5.7 | GO:0090131 | mesenchyme migration(GO:0090131) |
0.1 | 5.4 | GO:0000381 | regulation of alternative mRNA splicing, via spliceosome(GO:0000381) |
0.2 | 4.7 | GO:0042761 | very long-chain fatty acid biosynthetic process(GO:0042761) |
0.4 | 4.4 | GO:2000324 | positive regulation of glucocorticoid receptor signaling pathway(GO:2000324) |
0.0 | 4.1 | GO:0006941 | striated muscle contraction(GO:0006941) |
0.0 | 3.4 | GO:1902476 | chloride transmembrane transport(GO:1902476) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 11.5 | GO:0031143 | pseudopodium(GO:0031143) |
0.1 | 6.6 | GO:0005865 | striated muscle thin filament(GO:0005865) |
1.0 | 6.1 | GO:0005927 | muscle tendon junction(GO:0005927) |
1.0 | 5.9 | GO:0070470 | plasma membrane respiratory chain(GO:0070470) |
0.0 | 4.9 | GO:0034707 | chloride channel complex(GO:0034707) |
0.3 | 4.4 | GO:0033018 | sarcoplasmic reticulum lumen(GO:0033018) |
0.1 | 3.9 | GO:0009295 | nucleoid(GO:0009295) mitochondrial nucleoid(GO:0042645) |
0.2 | 2.9 | GO:0097512 | cardiac myofibril(GO:0097512) |
0.0 | 2.8 | GO:0031225 | anchored component of membrane(GO:0031225) |
0.1 | 2.1 | GO:0005744 | mitochondrial inner membrane presequence translocase complex(GO:0005744) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.9 | 11.7 | GO:0030375 | thyroid hormone receptor activator activity(GO:0010861) thyroid hormone receptor coactivator activity(GO:0030375) |
0.1 | 7.3 | GO:0043531 | ADP binding(GO:0043531) |
1.0 | 5.9 | GO:0031708 | endothelin B receptor binding(GO:0031708) |
0.0 | 4.9 | GO:0005254 | chloride channel activity(GO:0005254) |
0.2 | 4.8 | GO:0051537 | 2 iron, 2 sulfur cluster binding(GO:0051537) |
0.1 | 4.6 | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors(GO:0016627) |
0.0 | 4.6 | GO:0008022 | protein C-terminus binding(GO:0008022) |
0.1 | 2.9 | GO:0005212 | structural constituent of eye lens(GO:0005212) |
0.6 | 2.5 | GO:0008177 | succinate dehydrogenase (ubiquinone) activity(GO:0008177) |
0.1 | 2.5 | GO:0033130 | acetylcholine receptor binding(GO:0033130) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.4 | PID ENDOTHELIN PATHWAY | Endothelins |
0.1 | 5.7 | PID RHOA PATHWAY | RhoA signaling pathway |
0.0 | 2.0 | PID P75 NTR PATHWAY | p75(NTR)-mediated signaling |
0.1 | 1.8 | ST PAC1 RECEPTOR PATHWAY | PAC1 Receptor Pathway |
0.0 | 1.0 | ST P38 MAPK PATHWAY | p38 MAPK Pathway |
0.0 | 0.4 | PID UPA UPAR PATHWAY | Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 11.6 | REACTOME RAS ACTIVATION UOPN CA2 INFUX THROUGH NMDA RECEPTOR | Genes involved in Ras activation uopn Ca2+ infux through NMDA receptor |
0.1 | 6.6 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
0.0 | 4.5 | REACTOME PEPTIDE LIGAND BINDING RECEPTORS | Genes involved in Peptide ligand-binding receptors |
0.1 | 4.1 | REACTOME CITRIC ACID CYCLE TCA CYCLE | Genes involved in Citric acid cycle (TCA cycle) |
0.0 | 2.9 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.1 | 2.0 | REACTOME MITOCHONDRIAL FATTY ACID BETA OXIDATION | Genes involved in Mitochondrial Fatty Acid Beta-Oxidation |
0.0 | 1.8 | REACTOME MITOCHONDRIAL PROTEIN IMPORT | Genes involved in Mitochondrial Protein Import |
0.0 | 1.6 | REACTOME SYNTHESIS OF PIPS AT THE PLASMA MEMBRANE | Genes involved in Synthesis of PIPs at the plasma membrane |
0.0 | 1.3 | REACTOME PLATELET CALCIUM HOMEOSTASIS | Genes involved in Platelet calcium homeostasis |
0.1 | 1.0 | REACTOME REGULATION OF PYRUVATE DEHYDROGENASE PDH COMPLEX | Genes involved in Regulation of pyruvate dehydrogenase (PDH) complex |