Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
NRF1 | hg38_v1_chr7_+_129611680_129611760 | 0.45 | 1.0e-02 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 12.5 | GO:0051823 | regulation of synapse structural plasticity(GO:0051823) |
0.2 | 10.2 | GO:0038202 | TORC1 signaling(GO:0038202) |
1.4 | 9.6 | GO:0090258 | negative regulation of mitochondrial fission(GO:0090258) |
0.8 | 8.9 | GO:1904327 | tail-anchored membrane protein insertion into ER membrane(GO:0071816) protein localization to cytosolic proteasome complex(GO:1904327) protein localization to cytosolic proteasome complex involved in ERAD pathway(GO:1904379) |
0.2 | 8.1 | GO:0006370 | 7-methylguanosine mRNA capping(GO:0006370) |
0.4 | 7.8 | GO:0034587 | piRNA metabolic process(GO:0034587) |
1.1 | 7.7 | GO:0046601 | positive regulation of centriole replication(GO:0046601) |
0.9 | 7.3 | GO:0046061 | dATP catabolic process(GO:0046061) |
0.8 | 7.2 | GO:0007506 | gonadal mesoderm development(GO:0007506) |
0.1 | 6.9 | GO:0010824 | regulation of centrosome duplication(GO:0010824) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 34.7 | GO:0016604 | nuclear body(GO:0016604) |
0.1 | 18.4 | GO:0005814 | centriole(GO:0005814) |
0.2 | 14.0 | GO:0016235 | aggresome(GO:0016235) |
0.0 | 10.6 | GO:0031965 | nuclear membrane(GO:0031965) |
0.1 | 9.5 | GO:0009295 | nucleoid(GO:0009295) mitochondrial nucleoid(GO:0042645) |
1.2 | 9.2 | GO:0045298 | tubulin complex(GO:0045298) |
0.2 | 9.2 | GO:0071564 | npBAF complex(GO:0071564) |
0.1 | 9.1 | GO:0016605 | PML body(GO:0016605) |
0.8 | 8.9 | GO:0072379 | BAT3 complex(GO:0071818) ER membrane insertion complex(GO:0072379) |
0.1 | 8.6 | GO:0033017 | sarcoplasmic reticulum membrane(GO:0033017) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 42.8 | GO:0003677 | DNA binding(GO:0003677) |
0.0 | 27.8 | GO:0004842 | ubiquitin-protein transferase activity(GO:0004842) |
0.0 | 13.7 | GO:0005096 | GTPase activator activity(GO:0005096) |
0.2 | 12.3 | GO:0004683 | calmodulin-dependent protein kinase activity(GO:0004683) |
0.0 | 11.5 | GO:0004674 | protein serine/threonine kinase activity(GO:0004674) |
0.1 | 9.8 | GO:0030507 | spectrin binding(GO:0030507) |
2.3 | 9.1 | GO:0099609 | microtubule lateral binding(GO:0099609) |
0.1 | 9.1 | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity(GO:0008138) |
0.4 | 8.9 | GO:0015643 | toxic substance binding(GO:0015643) |
0.1 | 8.9 | GO:0004722 | protein serine/threonine phosphatase activity(GO:0004722) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 11.7 | PID P38 MKK3 6PATHWAY | p38 MAPK signaling pathway |
0.4 | 10.6 | PID P38 GAMMA DELTA PATHWAY | Signaling mediated by p38-gamma and p38-delta |
0.1 | 8.9 | PID PLK1 PATHWAY | PLK1 signaling events |
0.1 | 8.5 | PID HIV NEF PATHWAY | HIV-1 Nef: Negative effector of Fas and TNF-alpha |
0.1 | 7.6 | PID HES HEY PATHWAY | Notch-mediated HES/HEY network |
0.1 | 7.0 | PID ERA GENOMIC PATHWAY | Validated nuclear estrogen receptor alpha network |
0.1 | 6.6 | ST GAQ PATHWAY | G alpha q Pathway |
0.2 | 6.2 | PID DNA PK PATHWAY | DNA-PK pathway in nonhomologous end joining |
0.1 | 5.7 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
0.1 | 4.4 | PID SMAD2 3PATHWAY | Regulation of cytoplasmic and nuclear SMAD2/3 signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 21.2 | REACTOME GENERIC TRANSCRIPTION PATHWAY | Genes involved in Generic Transcription Pathway |
0.0 | 15.5 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.3 | 14.7 | REACTOME TRANSPORT OF MATURE MRNA DERIVED FROM AN INTRONLESS TRANSCRIPT | Genes involved in Transport of Mature mRNA Derived from an Intronless Transcript |
0.1 | 14.6 | REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES | Genes involved in Loss of Nlp from mitotic centrosomes |
0.3 | 13.2 | REACTOME UNBLOCKING OF NMDA RECEPTOR GLUTAMATE BINDING AND ACTIVATION | Genes involved in Unblocking of NMDA receptor, glutamate binding and activation |
0.2 | 9.8 | REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS | Genes involved in Caspase-mediated cleavage of cytoskeletal proteins |
0.3 | 7.6 | REACTOME VIRAL MESSENGER RNA SYNTHESIS | Genes involved in Viral Messenger RNA Synthesis |
0.1 | 7.3 | REACTOME ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS | Genes involved in Association of TriC/CCT with target proteins during biosynthesis |
0.2 | 7.1 | REACTOME DESTABILIZATION OF MRNA BY KSRP | Genes involved in Destabilization of mRNA by KSRP |
0.4 | 6.9 | REACTOME INHIBITION OF REPLICATION INITIATION OF DAMAGED DNA BY RB1 E2F1 | Genes involved in Inhibition of replication initiation of damaged DNA by RB1/E2F1 |