Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
NEUROG2 | hg38_v1_chr4_-_112516176_112516181 | 0.12 | 5.0e-01 | Click! |
OLIG3 | hg38_v1_chr6_-_137494387_137494400 | 0.06 | 7.4e-01 | Click! |
NEUROD2 | hg38_v1_chr17_-_39607876_39607966 | -0.05 | 8.0e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_-_23435652 Show fit | 12.41 |
ENST00000355349.4
|
myosin heavy chain 7 |
|
chr2_-_151525986 Show fit | 10.85 |
ENST00000434685.5
|
nebulin |
|
chr9_-_127873462 Show fit | 10.33 |
ENST00000223836.10
|
adenylate kinase 1 |
|
chr6_+_54083423 Show fit | 9.46 |
ENST00000460844.6
ENST00000370876.6 |
muscular LMNA interacting protein |
|
chr16_+_28878382 Show fit | 7.42 |
ENST00000357084.7
|
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 |
|
chr4_-_23881282 Show fit | 7.34 |
ENST00000613098.4
|
PPARG coactivator 1 alpha |
|
chr16_+_28878480 Show fit | 7.11 |
ENST00000395503.9
|
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 |
|
chr3_-_126357399 Show fit | 7.07 |
ENST00000296233.4
|
Kruppel like factor 15 |
|
chr15_+_62561361 Show fit | 6.51 |
ENST00000561311.5
|
talin 2 |
|
chr11_+_94768331 Show fit | 6.06 |
ENST00000317829.12
ENST00000433060.3 |
angiomotin like 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
6.7 | 26.9 | GO:0014724 | regulation of twitch skeletal muscle contraction(GO:0014724) |
0.0 | 14.9 | GO:0050911 | detection of chemical stimulus involved in sensory perception of smell(GO:0050911) |
3.6 | 10.9 | GO:0007525 | somatic muscle development(GO:0007525) |
0.0 | 10.9 | GO:0006986 | response to unfolded protein(GO:0006986) |
0.1 | 10.6 | GO:0015949 | nucleobase-containing small molecule interconversion(GO:0015949) |
0.3 | 8.2 | GO:0046069 | cGMP catabolic process(GO:0046069) |
0.5 | 8.0 | GO:0061302 | smooth muscle cell-matrix adhesion(GO:0061302) |
0.4 | 7.9 | GO:1900747 | negative regulation of vascular endothelial growth factor signaling pathway(GO:1900747) |
0.3 | 7.4 | GO:0052695 | cellular glucuronidation(GO:0052695) |
2.4 | 7.3 | GO:2000184 | cellular response to nitrite(GO:0071250) response to nitrite(GO:0080033) glomerular visceral epithelial cell apoptotic process(GO:1903210) regulation of glomerular visceral epithelial cell apoptotic process(GO:1904633) positive regulation of glomerular visceral epithelial cell apoptotic process(GO:1904635) response to resveratrol(GO:1904638) cellular response to resveratrol(GO:1904639) positive regulation of progesterone biosynthetic process(GO:2000184) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 16.9 | GO:0030018 | Z disc(GO:0030018) |
0.5 | 16.0 | GO:0031095 | platelet dense tubular network membrane(GO:0031095) |
0.2 | 12.8 | GO:0033017 | sarcoplasmic reticulum membrane(GO:0033017) |
0.4 | 11.9 | GO:0032982 | myosin filament(GO:0032982) |
0.1 | 11.0 | GO:0043204 | perikaryon(GO:0043204) |
0.1 | 9.9 | GO:0016235 | aggresome(GO:0016235) |
0.1 | 8.9 | GO:0005796 | Golgi lumen(GO:0005796) |
0.0 | 8.3 | GO:0045177 | apical part of cell(GO:0045177) |
0.1 | 8.2 | GO:0005891 | voltage-gated calcium channel complex(GO:0005891) |
0.0 | 8.1 | GO:0030426 | growth cone(GO:0030426) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 15.0 | GO:0008307 | structural constituent of muscle(GO:0008307) |
0.0 | 14.9 | GO:0004984 | olfactory receptor activity(GO:0004984) |
0.4 | 13.7 | GO:0005388 | calcium-transporting ATPase activity(GO:0005388) |
0.5 | 12.9 | GO:0030898 | actin-dependent ATPase activity(GO:0030898) |
0.5 | 10.3 | GO:0004017 | adenylate kinase activity(GO:0004017) |
0.3 | 9.6 | GO:0031005 | filamin binding(GO:0031005) |
0.1 | 9.0 | GO:0004860 | protein kinase inhibitor activity(GO:0004860) |
0.4 | 8.0 | GO:0038062 | protein tyrosine kinase collagen receptor activity(GO:0038062) |
0.2 | 7.4 | GO:0008093 | cytoskeletal adaptor activity(GO:0008093) |
0.4 | 7.3 | GO:0042975 | peroxisome proliferator activated receptor binding(GO:0042975) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 8.3 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
0.1 | 5.7 | PID PI3K PLC TRK PATHWAY | Trk receptor signaling mediated by PI3K and PLC-gamma |
0.1 | 5.5 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.1 | 5.0 | PID TAP63 PATHWAY | Validated transcriptional targets of TAp63 isoforms |
0.1 | 4.4 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.1 | 4.2 | ST GA12 PATHWAY | G alpha 12 Pathway |
0.0 | 3.4 | PID MYC REPRESS PATHWAY | Validated targets of C-MYC transcriptional repression |
0.0 | 3.3 | PID FANCONI PATHWAY | Fanconi anemia pathway |
0.0 | 3.3 | PID LKB1 PATHWAY | LKB1 signaling events |
0.1 | 3.2 | PID PRL SIGNALING EVENTS PATHWAY | Signaling events mediated by PRL |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 14.8 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.4 | 14.5 | REACTOME PRE NOTCH PROCESSING IN GOLGI | Genes involved in Pre-NOTCH Processing in Golgi |
0.0 | 14.0 | REACTOME OLFACTORY SIGNALING PATHWAY | Genes involved in Olfactory Signaling Pathway |
0.3 | 10.6 | REACTOME SYNTHESIS AND INTERCONVERSION OF NUCLEOTIDE DI AND TRIPHOSPHATES | Genes involved in Synthesis and interconversion of nucleotide di- and triphosphates |
0.3 | 8.1 | REACTOME GLUCURONIDATION | Genes involved in Glucuronidation |
0.2 | 8.0 | REACTOME CGMP EFFECTS | Genes involved in cGMP effects |
0.3 | 7.9 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.2 | 7.3 | REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA | Genes involved in Circadian Repression of Expression by REV-ERBA |
0.0 | 7.0 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.1 | 6.6 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |