Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
RAD21 | hg38_v1_chr8_-_116874746_116874828 | 0.39 | 2.7e-02 | Click! |
SMC3 | hg38_v1_chr10_+_110567666_110567765 | 0.29 | 1.0e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr22_+_22195753 Show fit | 3.40 |
ENST00000390285.4
|
immunoglobulin lambda variable 6-57 |
|
chr7_+_142626642 Show fit | 3.38 |
ENST00000390394.3
|
T cell receptor beta variable 20-1 |
|
chr11_+_1876467 Show fit | 3.31 |
ENST00000432093.1
|
lymphocyte specific protein 1 |
|
chr22_+_22409755 Show fit | 3.23 |
ENST00000390299.2
|
immunoglobulin lambda variable 1-40 |
|
chr14_+_21868822 Show fit | 3.14 |
ENST00000390436.2
|
T cell receptor alpha variable 13-1 |
|
chr14_+_21887848 Show fit | 3.08 |
ENST00000390437.2
|
T cell receptor alpha variable 12-2 |
|
chr22_+_22343185 Show fit | 2.96 |
ENST00000427632.2
|
immunoglobulin lambda variable 9-49 |
|
chr14_+_21723693 Show fit | 2.89 |
ENST00000390425.2
|
T cell receptor alpha variable 3 |
|
chr7_+_142740206 Show fit | 2.73 |
ENST00000422143.2
|
T cell receptor beta variable 29-1 |
|
chr22_+_22380766 Show fit | 2.68 |
ENST00000390297.3
|
immunoglobulin lambda variable 1-44 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 16.0 | GO:0038096 | immune response-regulating cell surface receptor signaling pathway involved in phagocytosis(GO:0002433) Fc-gamma receptor signaling pathway involved in phagocytosis(GO:0038096) |
0.0 | 8.2 | GO:0002377 | immunoglobulin production(GO:0002377) |
0.1 | 5.0 | GO:0046339 | diacylglycerol metabolic process(GO:0046339) |
0.5 | 4.7 | GO:0031444 | slow-twitch skeletal muscle fiber contraction(GO:0031444) |
0.2 | 4.4 | GO:0038180 | nerve growth factor signaling pathway(GO:0038180) |
0.7 | 3.3 | GO:2000813 | negative regulation of barbed-end actin filament capping(GO:2000813) |
0.0 | 3.3 | GO:0006968 | cellular defense response(GO:0006968) |
0.8 | 3.1 | GO:2000434 | regulation of protein neddylation(GO:2000434) negative regulation of protein neddylation(GO:2000435) |
0.6 | 2.9 | GO:0090290 | positive regulation of osteoclast proliferation(GO:0090290) |
0.0 | 2.9 | GO:0050728 | negative regulation of inflammatory response(GO:0050728) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 8.5 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
0.2 | 4.7 | GO:0005861 | troponin complex(GO:0005861) |
0.0 | 4.3 | GO:0030670 | phagocytic vesicle membrane(GO:0030670) |
0.0 | 3.9 | GO:0032587 | ruffle membrane(GO:0032587) |
0.2 | 3.2 | GO:0044354 | pinosome(GO:0044352) macropinosome(GO:0044354) |
0.0 | 3.1 | GO:0005802 | trans-Golgi network(GO:0005802) |
0.1 | 2.9 | GO:0031233 | intrinsic component of external side of plasma membrane(GO:0031233) |
0.0 | 2.8 | GO:0030136 | clathrin-coated vesicle(GO:0030136) |
0.2 | 2.7 | GO:0008282 | ATP-sensitive potassium channel complex(GO:0008282) |
0.1 | 2.7 | GO:0036449 | microtubule minus-end(GO:0036449) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 27.1 | GO:0003823 | antigen binding(GO:0003823) |
0.0 | 6.4 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
0.2 | 5.1 | GO:0004143 | diacylglycerol kinase activity(GO:0004143) |
0.3 | 4.7 | GO:0031014 | troponin T binding(GO:0031014) |
0.2 | 4.4 | GO:0017034 | Rap guanyl-nucleotide exchange factor activity(GO:0017034) |
0.3 | 3.1 | GO:1990948 | ligase inhibitor activity(GO:0055104) ubiquitin ligase inhibitor activity(GO:1990948) |
0.1 | 3.0 | GO:0019992 | diacylglycerol binding(GO:0019992) |
0.3 | 2.8 | GO:0004996 | thyroid-stimulating hormone receptor activity(GO:0004996) |
0.2 | 2.7 | GO:0015272 | ATP-activated inward rectifier potassium channel activity(GO:0015272) |
0.0 | 2.6 | GO:0017112 | Rab guanyl-nucleotide exchange factor activity(GO:0017112) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.7 | ST T CELL SIGNAL TRANSDUCTION | T Cell Signal Transduction |
0.1 | 4.8 | PID IL27 PATHWAY | IL27-mediated signaling events |
0.1 | 4.8 | PID REELIN PATHWAY | Reelin signaling pathway |
0.0 | 4.3 | PID AR PATHWAY | Coregulation of Androgen receptor activity |
0.0 | 4.2 | PID ERBB1 DOWNSTREAM PATHWAY | ErbB1 downstream signaling |
0.0 | 4.1 | PID ARF6 PATHWAY | Arf6 signaling events |
0.0 | 4.0 | PID P53 REGULATION PATHWAY | p53 pathway |
0.1 | 3.3 | PID P38 MK2 PATHWAY | p38 signaling mediated by MAPKAP kinases |
0.0 | 3.0 | PID PI3KCI PATHWAY | Class I PI3K signaling events |
0.0 | 2.8 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 9.2 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |
0.1 | 4.8 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.1 | 4.7 | REACTOME EFFECTS OF PIP2 HYDROLYSIS | Genes involved in Effects of PIP2 hydrolysis |
0.2 | 4.2 | REACTOME ARMS MEDIATED ACTIVATION | Genes involved in ARMS-mediated activation |
0.0 | 3.8 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.2 | 2.8 | REACTOME HORMONE LIGAND BINDING RECEPTORS | Genes involved in Hormone ligand-binding receptors |
0.0 | 2.8 | REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION | Genes involved in Transcriptional Regulation of White Adipocyte Differentiation |
0.0 | 2.7 | REACTOME INWARDLY RECTIFYING K CHANNELS | Genes involved in Inwardly rectifying K+ channels |
0.1 | 2.4 | REACTOME TGF BETA RECEPTOR SIGNALING IN EMT EPITHELIAL TO MESENCHYMAL TRANSITION | Genes involved in TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition) |
0.0 | 2.2 | REACTOME G ALPHA Q SIGNALLING EVENTS | Genes involved in G alpha (q) signalling events |