Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
RARG | hg38_v1_chr12_-_53232182_53232256 | -0.18 | 3.4e-01 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.7 | 13.7 | GO:1901202 | negative regulation of extracellular matrix assembly(GO:1901202) |
0.6 | 12.3 | GO:1900747 | negative regulation of vascular endothelial growth factor signaling pathway(GO:1900747) |
1.0 | 11.5 | GO:2000324 | positive regulation of glucocorticoid receptor signaling pathway(GO:2000324) |
0.2 | 11.3 | GO:0006120 | mitochondrial electron transport, NADH to ubiquinone(GO:0006120) |
0.3 | 8.3 | GO:1901881 | positive regulation of protein depolymerization(GO:1901881) |
0.1 | 8.0 | GO:0015701 | bicarbonate transport(GO:0015701) |
0.5 | 7.9 | GO:1904322 | response to forskolin(GO:1904321) cellular response to forskolin(GO:1904322) |
1.9 | 7.8 | GO:0001869 | regulation of complement activation, lectin pathway(GO:0001868) negative regulation of complement activation, lectin pathway(GO:0001869) |
0.3 | 7.3 | GO:0019371 | cyclooxygenase pathway(GO:0019371) |
0.2 | 7.1 | GO:0035641 | locomotory exploration behavior(GO:0035641) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 23.7 | GO:0030018 | Z disc(GO:0030018) |
0.3 | 15.7 | GO:0031527 | filopodium membrane(GO:0031527) |
0.1 | 13.3 | GO:0043209 | myelin sheath(GO:0043209) |
0.0 | 13.2 | GO:0005788 | endoplasmic reticulum lumen(GO:0005788) |
0.1 | 13.1 | GO:0031225 | anchored component of membrane(GO:0031225) |
1.0 | 12.8 | GO:0098647 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
0.1 | 12.4 | GO:0005796 | Golgi lumen(GO:0005796) |
0.5 | 12.0 | GO:0005890 | sodium:potassium-exchanging ATPase complex(GO:0005890) |
0.0 | 11.5 | GO:0005759 | mitochondrial matrix(GO:0005759) |
0.5 | 10.7 | GO:0031089 | platelet dense granule lumen(GO:0031089) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 19.9 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.2 | 12.8 | GO:0050136 | NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136) |
0.1 | 12.7 | GO:0005518 | collagen binding(GO:0005518) |
0.1 | 11.9 | GO:0050840 | extracellular matrix binding(GO:0050840) |
0.6 | 10.6 | GO:1990239 | steroid hormone binding(GO:1990239) |
0.2 | 9.0 | GO:0008093 | cytoskeletal adaptor activity(GO:0008093) |
0.0 | 8.2 | GO:0003774 | motor activity(GO:0003774) |
0.2 | 7.8 | GO:0001972 | retinoic acid binding(GO:0001972) |
1.4 | 7.0 | GO:0004667 | prostaglandin-D synthase activity(GO:0004667) |
0.2 | 7.0 | GO:0031005 | filamin binding(GO:0031005) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 44.2 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.1 | 29.6 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.1 | 21.9 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.2 | 14.8 | NABA BASEMENT MEMBRANES | Genes encoding structural components of basement membranes |
0.2 | 14.2 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.3 | 12.3 | PID ANTHRAX PATHWAY | Cellular roles of Anthrax toxin |
0.1 | 7.2 | PID INTEGRIN1 PATHWAY | Beta1 integrin cell surface interactions |
0.0 | 6.9 | NABA MATRISOME ASSOCIATED | Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors |
0.1 | 6.4 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.2 | 5.8 | PID INTEGRIN5 PATHWAY | Beta5 beta6 beta7 and beta8 integrin cell surface interactions |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 19.4 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.2 | 16.8 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
0.1 | 15.0 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
0.2 | 12.0 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.4 | 10.3 | REACTOME INTRINSIC PATHWAY | Genes involved in Intrinsic Pathway |
0.7 | 10.0 | REACTOME CREATION OF C4 AND C2 ACTIVATORS | Genes involved in Creation of C4 and C2 activators |
0.1 | 8.6 | REACTOME NETRIN1 SIGNALING | Genes involved in Netrin-1 signaling |
0.2 | 8.2 | REACTOME COMPLEMENT CASCADE | Genes involved in Complement cascade |
0.3 | 7.5 | REACTOME ADENYLATE CYCLASE INHIBITORY PATHWAY | Genes involved in Adenylate cyclase inhibitory pathway |
0.2 | 7.3 | REACTOME KINESINS | Genes involved in Kinesins |