Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
RBPJ | hg38_v1_chr4_+_26343132_26343151 | 0.49 | 4.7e-03 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 22.4 | GO:0010811 | positive regulation of cell-substrate adhesion(GO:0010811) |
5.4 | 16.2 | GO:0061027 | umbilical cord morphogenesis(GO:0036304) umbilical cord development(GO:0061027) |
0.7 | 9.7 | GO:0030091 | protein repair(GO:0030091) |
0.3 | 9.5 | GO:0033622 | integrin activation(GO:0033622) |
0.0 | 9.0 | GO:0060333 | interferon-gamma-mediated signaling pathway(GO:0060333) |
0.1 | 7.1 | GO:0010842 | retina layer formation(GO:0010842) |
0.4 | 7.0 | GO:1904259 | regulation of basement membrane assembly involved in embryonic body morphogenesis(GO:1904259) positive regulation of basement membrane assembly involved in embryonic body morphogenesis(GO:1904261) basement membrane assembly involved in embryonic body morphogenesis(GO:2001197) |
0.4 | 6.9 | GO:0006828 | manganese ion transport(GO:0006828) |
1.7 | 6.8 | GO:0021649 | vestibulocochlear nerve structural organization(GO:0021649) positive regulation of cytokine activity(GO:0060301) ganglion morphogenesis(GO:0061552) VEGF-activated neuropilin signaling pathway involved in axon guidance(GO:1902378) dorsal root ganglion morphogenesis(GO:1904835) otic placode development(GO:1905040) |
1.3 | 6.3 | GO:0032765 | positive regulation of mast cell cytokine production(GO:0032765) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 21.5 | GO:0005614 | interstitial matrix(GO:0005614) |
0.0 | 12.6 | GO:0043235 | receptor complex(GO:0043235) |
0.0 | 10.7 | GO:0031225 | anchored component of membrane(GO:0031225) |
0.2 | 9.5 | GO:0031258 | lamellipodium membrane(GO:0031258) |
0.4 | 7.0 | GO:0045180 | basal cortex(GO:0045180) |
0.7 | 6.8 | GO:0097443 | sorting endosome(GO:0097443) |
0.3 | 5.3 | GO:0005915 | zonula adherens(GO:0005915) |
0.0 | 4.9 | GO:0030018 | Z disc(GO:0030018) |
0.0 | 4.6 | GO:0016328 | lateral plasma membrane(GO:0016328) |
0.2 | 4.3 | GO:0005751 | mitochondrial respiratory chain complex IV(GO:0005751) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
4.8 | 19.0 | GO:0035939 | microsatellite binding(GO:0035939) |
0.1 | 18.1 | GO:0005518 | collagen binding(GO:0005518) |
1.1 | 9.7 | GO:0033743 | peptide-methionine (R)-S-oxide reductase activity(GO:0033743) |
0.1 | 9.5 | GO:0005547 | phosphatidylinositol-3,4,5-trisphosphate binding(GO:0005547) |
0.1 | 8.5 | GO:0001618 | virus receptor activity(GO:0001618) |
0.2 | 7.3 | GO:0008569 | ATP-dependent microtubule motor activity, minus-end-directed(GO:0008569) |
0.3 | 7.1 | GO:0042813 | Wnt-activated receptor activity(GO:0042813) |
0.5 | 6.9 | GO:0015279 | store-operated calcium channel activity(GO:0015279) |
0.6 | 6.8 | GO:0038085 | vascular endothelial growth factor binding(GO:0038085) |
0.3 | 6.0 | GO:0038062 | protein tyrosine kinase collagen receptor activity(GO:0038062) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 23.6 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.2 | 15.3 | PID HES HEY PATHWAY | Notch-mediated HES/HEY network |
0.1 | 7.0 | ST GA12 PATHWAY | G alpha 12 Pathway |
0.3 | 6.8 | PID VEGF VEGFR PATHWAY | VEGF and VEGFR signaling network |
0.0 | 6.6 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 6.5 | PID FGF PATHWAY | FGF signaling pathway |
0.1 | 4.6 | PID ECADHERIN STABILIZATION PATHWAY | Stabilization and expansion of the E-cadherin adherens junction |
0.1 | 4.4 | PID A6B1 A6B4 INTEGRIN PATHWAY | a6b1 and a6b4 Integrin signaling |
0.1 | 4.0 | PID LYMPH ANGIOGENESIS PATHWAY | VEGFR3 signaling in lymphatic endothelium |
0.1 | 3.8 | PID EPHA FWDPATHWAY | EPHA forward signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 13.9 | REACTOME NOTCH1 INTRACELLULAR DOMAIN REGULATES TRANSCRIPTION | Genes involved in NOTCH1 Intracellular Domain Regulates Transcription |
0.0 | 11.1 | REACTOME GENERIC TRANSCRIPTION PATHWAY | Genes involved in Generic Transcription Pathway |
0.2 | 8.6 | REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS | Genes involved in Cell-extracellular matrix interactions |
0.1 | 8.5 | REACTOME SIGNAL TRANSDUCTION BY L1 | Genes involved in Signal transduction by L1 |
0.3 | 6.8 | REACTOME VEGF LIGAND RECEPTOR INTERACTIONS | Genes involved in VEGF ligand-receptor interactions |
0.1 | 5.1 | REACTOME ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS | Genes involved in Association of TriC/CCT with target proteins during biosynthesis |
0.2 | 4.0 | REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN | Genes involved in Platelet Adhesion to exposed collagen |
0.1 | 3.4 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.2 | 3.0 | REACTOME REGULATION OF INSULIN SECRETION BY ACETYLCHOLINE | Genes involved in Regulation of Insulin Secretion by Acetylcholine |
0.1 | 2.9 | REACTOME OTHER SEMAPHORIN INTERACTIONS | Genes involved in Other semaphorin interactions |