Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
MTA3 | hg38_v1_chr2_+_42494547_42494583 | 0.59 | 3.9e-04 | Click! |
RCOR1 | hg38_v1_chr14_+_102592611_102592668 | -0.23 | 2.1e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr2_+_47369301 Show fit | 15.25 |
ENST00000263735.9
|
epithelial cell adhesion molecule |
|
chr8_+_119208322 Show fit | 13.13 |
ENST00000614891.5
|
mal, T cell differentiation protein 2 |
|
chr7_-_150341615 Show fit | 11.43 |
ENST00000223271.8
ENST00000466675.5 ENST00000482669.1 ENST00000467793.5 |
retinoic acid receptor responder 2 |
|
chr11_-_119423162 Show fit | 10.59 |
ENST00000284240.10
ENST00000524970.5 |
Thy-1 cell surface antigen |
|
chr19_+_44905785 Show fit | 10.46 |
ENST00000446996.5
ENST00000252486.9 ENST00000434152.5 |
apolipoprotein E |
|
chr9_+_130172343 Show fit | 9.09 |
ENST00000372398.6
|
neuronal calcium sensor 1 |
|
chr1_-_21669301 Show fit | 8.93 |
ENST00000542643.6
ENST00000317967.11 ENST00000374765.9 ENST00000290101.8 |
RAP1 GTPase activating protein |
|
chr2_+_39665902 Show fit | 8.77 |
ENST00000281961.3
ENST00000618232.1 |
transmembrane protein 178A |
|
chr19_-_48646155 Show fit | 8.55 |
ENST00000084798.9
|
carbonic anhydrase 11 |
|
chr18_-_26863187 Show fit | 8.41 |
ENST00000440832.7
|
aquaporin 4 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.1 | 65.6 | GO:0007214 | gamma-aminobutyric acid signaling pathway(GO:0007214) |
0.3 | 65.3 | GO:0007156 | homophilic cell adhesion via plasma membrane adhesion molecules(GO:0007156) |
1.0 | 50.8 | GO:0008038 | neuron recognition(GO:0008038) |
0.6 | 48.2 | GO:0051965 | positive regulation of synapse assembly(GO:0051965) |
1.1 | 43.0 | GO:0016338 | calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules(GO:0016338) |
5.0 | 40.3 | GO:1902847 | regulation of neuronal signal transduction(GO:1902847) positive regulation of neurofibrillary tangle assembly(GO:1902998) |
0.7 | 34.1 | GO:1903861 | positive regulation of dendrite extension(GO:1903861) |
2.6 | 34.0 | GO:0051611 | negative regulation of neurotransmitter uptake(GO:0051581) regulation of serotonin uptake(GO:0051611) negative regulation of serotonin uptake(GO:0051612) |
1.8 | 33.0 | GO:0032291 | central nervous system myelination(GO:0022010) axon ensheathment in central nervous system(GO:0032291) |
0.7 | 32.8 | GO:0035735 | intraciliary transport involved in cilium morphogenesis(GO:0035735) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 292.4 | GO:1903561 | extracellular vesicle(GO:1903561) |
0.1 | 285.0 | GO:0016021 | integral component of membrane(GO:0016021) |
0.6 | 202.0 | GO:0060076 | excitatory synapse(GO:0060076) |
0.2 | 176.6 | GO:0005789 | endoplasmic reticulum membrane(GO:0005789) |
0.3 | 129.1 | GO:0043025 | neuronal cell body(GO:0043025) |
1.1 | 117.1 | GO:0043195 | terminal bouton(GO:0043195) |
0.5 | 93.7 | GO:0070160 | occluding junction(GO:0070160) |
0.1 | 92.8 | GO:0048471 | perinuclear region of cytoplasm(GO:0048471) |
0.3 | 89.7 | GO:0045177 | apical part of cell(GO:0045177) |
0.2 | 81.3 | GO:0000139 | Golgi membrane(GO:0000139) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 127.5 | GO:0005509 | calcium ion binding(GO:0005509) |
0.4 | 70.7 | GO:0005200 | structural constituent of cytoskeleton(GO:0005200) |
0.8 | 69.1 | GO:0019894 | kinesin binding(GO:0019894) |
0.2 | 68.3 | GO:0003924 | GTPase activity(GO:0003924) |
0.6 | 60.3 | GO:0030276 | clathrin binding(GO:0030276) |
0.4 | 55.8 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
1.2 | 51.4 | GO:0050750 | low-density lipoprotein particle receptor binding(GO:0050750) |
1.2 | 44.7 | GO:0043274 | phospholipase binding(GO:0043274) |
1.0 | 44.4 | GO:0098632 | protein binding involved in cell-cell adhesion(GO:0098632) |
0.7 | 41.4 | GO:0050699 | WW domain binding(GO:0050699) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 87.0 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.2 | 71.4 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.6 | 63.3 | PID INTEGRIN1 PATHWAY | Beta1 integrin cell surface interactions |
0.6 | 53.4 | PID A6B1 A6B4 INTEGRIN PATHWAY | a6b1 and a6b4 Integrin signaling |
0.5 | 47.5 | ST FAS SIGNALING PATHWAY | Fas Signaling Pathway |
0.8 | 47.4 | PID NEPHRIN NEPH1 PATHWAY | Nephrin/Neph1 signaling in the kidney podocyte |
0.7 | 44.3 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.4 | 43.1 | PID FGF PATHWAY | FGF signaling pathway |
0.1 | 34.4 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.6 | 33.1 | ST MYOCYTE AD PATHWAY | Myocyte Adrenergic Pathway is a specific case of the generalized Adrenergic Pathway. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 102.8 | REACTOME L1CAM INTERACTIONS | Genes involved in L1CAM interactions |
0.3 | 61.3 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
1.2 | 57.9 | REACTOME A TETRASACCHARIDE LINKER SEQUENCE IS REQUIRED FOR GAG SYNTHESIS | Genes involved in A tetrasaccharide linker sequence is required for GAG synthesis |
1.3 | 56.8 | REACTOME GABA A RECEPTOR ACTIVATION | Genes involved in GABA A receptor activation |
0.7 | 53.7 | REACTOME VOLTAGE GATED POTASSIUM CHANNELS | Genes involved in Voltage gated Potassium channels |
1.7 | 50.5 | REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION | Genes involved in GABA synthesis, release, reuptake and degradation |
1.6 | 50.4 | REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Dopamine Neurotransmitter Release Cycle |
0.3 | 49.4 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
1.0 | 48.8 | REACTOME TIGHT JUNCTION INTERACTIONS | Genes involved in Tight junction interactions |
0.8 | 47.5 | REACTOME INHIBITION OF INSULIN SECRETION BY ADRENALINE NORADRENALINE | Genes involved in Inhibition of Insulin Secretion by Adrenaline/Noradrenaline |