Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
RFX2 | hg38_v1_chr19_-_6199510_6199564 | 0.65 | 5.5e-05 | Click! |
RFX3 | hg38_v1_chr9_-_3489426_3489487 | 0.63 | 1.3e-04 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
3.5 | 146.7 | GO:0044458 | motile cilium assembly(GO:0044458) |
1.5 | 65.6 | GO:0035082 | axoneme assembly(GO:0035082) |
0.2 | 39.8 | GO:0060271 | cilium morphogenesis(GO:0060271) |
0.2 | 34.5 | GO:1903955 | positive regulation of protein targeting to mitochondrion(GO:1903955) |
0.2 | 33.1 | GO:0018107 | peptidyl-threonine phosphorylation(GO:0018107) |
0.3 | 32.9 | GO:0060997 | dendritic spine morphogenesis(GO:0060997) |
4.1 | 32.5 | GO:0002318 | myeloid progenitor cell differentiation(GO:0002318) |
0.2 | 31.9 | GO:0048813 | dendrite morphogenesis(GO:0048813) |
1.5 | 31.2 | GO:0038166 | angiotensin-activated signaling pathway(GO:0038166) |
2.0 | 29.9 | GO:0007258 | JUN phosphorylation(GO:0007258) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.1 | 131.7 | GO:0097014 | axoneme(GO:0005930) ciliary plasm(GO:0097014) |
0.2 | 126.2 | GO:0005874 | microtubule(GO:0005874) |
0.3 | 123.2 | GO:0005929 | cilium(GO:0005929) |
0.6 | 112.4 | GO:0001669 | acrosomal vesicle(GO:0001669) |
0.1 | 67.3 | GO:0048471 | perinuclear region of cytoplasm(GO:0048471) |
7.8 | 62.2 | GO:0002177 | manchette(GO:0002177) |
1.4 | 48.5 | GO:0030992 | intraciliary transport particle B(GO:0030992) |
0.8 | 39.3 | GO:0034451 | centriolar satellite(GO:0034451) |
3.4 | 37.2 | GO:0072687 | meiotic spindle(GO:0072687) |
0.2 | 36.6 | GO:0042734 | presynaptic membrane(GO:0042734) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 146.8 | GO:0008017 | microtubule binding(GO:0008017) |
0.1 | 44.3 | GO:0005516 | calmodulin binding(GO:0005516) |
0.5 | 42.1 | GO:0003777 | microtubule motor activity(GO:0003777) |
0.2 | 33.3 | GO:0030165 | PDZ domain binding(GO:0030165) |
1.8 | 31.2 | GO:0009931 | calcium-dependent protein serine/threonine kinase activity(GO:0009931) |
2.3 | 29.9 | GO:0016909 | JUN kinase activity(GO:0004705) SAP kinase activity(GO:0016909) |
0.1 | 29.6 | GO:0003924 | GTPase activity(GO:0003924) |
0.3 | 27.2 | GO:0004693 | cyclin-dependent protein serine/threonine kinase activity(GO:0004693) |
0.1 | 26.1 | GO:0008013 | beta-catenin binding(GO:0008013) |
2.5 | 25.5 | GO:0031811 | G-protein coupled nucleotide receptor binding(GO:0031811) P2Y1 nucleotide receptor binding(GO:0031812) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 36.7 | ST WNT CA2 CYCLIC GMP PATHWAY | Wnt/Ca2+/cyclic GMP signaling. |
0.7 | 35.9 | ST MYOCYTE AD PATHWAY | Myocyte Adrenergic Pathway is a specific case of the generalized Adrenergic Pathway. |
0.3 | 29.7 | ST FAS SIGNALING PATHWAY | Fas Signaling Pathway |
0.2 | 25.7 | PID RAC1 REG PATHWAY | Regulation of RAC1 activity |
0.6 | 25.6 | ST GRANULE CELL SURVIVAL PATHWAY | Granule Cell Survival Pathway is a specific case of more general PAC1 Receptor Pathway. |
1.0 | 21.4 | SA REG CASCADE OF CYCLIN EXPR | Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases. |
0.2 | 12.9 | PID AURORA B PATHWAY | Aurora B signaling |
0.2 | 11.1 | PID ATM PATHWAY | ATM pathway |
0.1 | 10.0 | PID FGF PATHWAY | FGF signaling pathway |
0.0 | 9.7 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 36.7 | REACTOME RAS ACTIVATION UOPN CA2 INFUX THROUGH NMDA RECEPTOR | Genes involved in Ras activation uopn Ca2+ infux through NMDA receptor |
0.6 | 28.6 | REACTOME KINESINS | Genes involved in Kinesins |
0.8 | 26.2 | REACTOME CYCLIN A B1 ASSOCIATED EVENTS DURING G2 M TRANSITION | Genes involved in Cyclin A/B1 associated events during G2/M transition |
0.9 | 25.6 | REACTOME ACTIVATION OF THE AP1 FAMILY OF TRANSCRIPTION FACTORS | Genes involved in Activation of the AP-1 family of transcription factors |
0.1 | 24.5 | REACTOME CELL SURFACE INTERACTIONS AT THE VASCULAR WALL | Genes involved in Cell surface interactions at the vascular wall |
0.3 | 24.3 | REACTOME SIGNALING BY ROBO RECEPTOR | Genes involved in Signaling by Robo receptor |
0.4 | 23.5 | REACTOME CA DEPENDENT EVENTS | Genes involved in Ca-dependent events |
0.0 | 16.1 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.0 | 14.3 | REACTOME GENERIC TRANSCRIPTION PATHWAY | Genes involved in Generic Transcription Pathway |
0.6 | 11.1 | REACTOME SIGNALING BY FGFR3 MUTANTS | Genes involved in Signaling by FGFR3 mutants |