Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
RREB1 | hg38_v1_chr6_+_7107941_7108031 | 0.55 | 1.2e-03 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr12_-_52680398 Show fit | 2.72 |
ENST00000252244.3
|
keratin 1 |
|
chr17_+_43847168 Show fit | 2.41 |
ENST00000317310.5
|
CD300 molecule like family member g |
|
chr17_+_43847142 Show fit | 2.22 |
ENST00000377203.8
ENST00000539718.5 ENST00000588884.1 ENST00000293396.12 ENST00000586233.5 |
CD300 molecule like family member g |
|
chr10_+_17229267 Show fit | 1.96 |
ENST00000224237.9
|
vimentin |
|
chr10_+_113679159 Show fit | 1.91 |
ENST00000621345.4
ENST00000429617.5 ENST00000369331.8 |
caspase 7 |
|
chr10_+_17228806 Show fit | 1.79 |
ENST00000497849.1
|
vimentin |
|
chr1_+_170663134 Show fit | 1.69 |
ENST00000367760.7
|
paired related homeobox 1 |
|
chr8_+_37695774 Show fit | 1.66 |
ENST00000331569.6
|
zinc finger protein 703 |
|
chr12_+_54008961 Show fit | 1.57 |
ENST00000040584.6
|
homeobox C8 |
|
chrX_+_151912878 Show fit | 1.54 |
ENST00000276344.6
|
MAGE family member A4 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 4.6 | GO:0002414 | immunoglobulin transcytosis in epithelial cells(GO:0002414) |
0.2 | 4.4 | GO:0006183 | GTP biosynthetic process(GO:0006183) |
0.2 | 3.7 | GO:0060020 | Bergmann glial cell differentiation(GO:0060020) |
0.3 | 3.6 | GO:0071492 | cellular response to UV-A(GO:0071492) |
0.2 | 2.8 | GO:0018401 | peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) |
0.2 | 2.7 | GO:0001867 | complement activation, lectin pathway(GO:0001867) |
0.4 | 2.6 | GO:0002803 | positive regulation of antimicrobial peptide production(GO:0002225) positive regulation of antibacterial peptide production(GO:0002803) |
0.0 | 2.4 | GO:0009952 | anterior/posterior pattern specification(GO:0009952) |
0.4 | 2.3 | GO:0042494 | detection of bacterial lipoprotein(GO:0042494) |
0.4 | 2.3 | GO:0035407 | histone H3-T11 phosphorylation(GO:0035407) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.9 | GO:0032585 | multivesicular body membrane(GO:0032585) |
0.0 | 4.2 | GO:0005882 | intermediate filament(GO:0005882) |
0.0 | 4.2 | GO:0001650 | fibrillar center(GO:0001650) |
0.0 | 4.0 | GO:0005903 | brush border(GO:0005903) |
0.0 | 3.4 | GO:0097610 | cleavage furrow(GO:0032154) cell surface furrow(GO:0097610) |
0.0 | 3.4 | GO:0005758 | mitochondrial intermembrane space(GO:0005758) |
0.0 | 3.0 | GO:0001533 | cornified envelope(GO:0001533) |
0.4 | 2.6 | GO:0097209 | epidermal lamellar body(GO:0097209) |
0.1 | 2.1 | GO:0030014 | CCR4-NOT complex(GO:0030014) |
0.2 | 2.0 | GO:0097443 | sorting endosome(GO:0097443) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.6 | GO:0019865 | immunoglobulin binding(GO:0019865) |
0.0 | 4.3 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
0.5 | 3.7 | GO:1990254 | keratin filament binding(GO:1990254) |
0.2 | 3.4 | GO:1901612 | cardiolipin binding(GO:1901612) |
0.2 | 3.0 | GO:0030280 | structural constituent of epidermis(GO:0030280) |
0.3 | 2.8 | GO:0019826 | oxygen sensor activity(GO:0019826) |
0.1 | 2.8 | GO:0071837 | HMG box domain binding(GO:0071837) |
0.0 | 2.8 | GO:0070491 | repressing transcription factor binding(GO:0070491) |
0.4 | 2.3 | GO:0035402 | histone kinase activity (H3-T11 specific)(GO:0035402) |
0.0 | 2.3 | GO:0001968 | fibronectin binding(GO:0001968) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.9 | PID ILK PATHWAY | Integrin-linked kinase signaling |
0.0 | 4.1 | PID E2F PATHWAY | E2F transcription factor network |
0.1 | 3.7 | PID AURORA B PATHWAY | Aurora B signaling |
0.1 | 3.1 | PID HIF1A PATHWAY | Hypoxic and oxygen homeostasis regulation of HIF-1-alpha |
0.0 | 2.7 | PID BETA CATENIN NUC PATHWAY | Regulation of nuclear beta catenin signaling and target gene transcription |
0.1 | 2.3 | PID P38 GAMMA DELTA PATHWAY | Signaling mediated by p38-gamma and p38-delta |
0.0 | 2.3 | PID S1P S1P3 PATHWAY | S1P3 pathway |
0.0 | 2.3 | ST ERK1 ERK2 MAPK PATHWAY | ERK1/ERK2 MAPK Pathway |
0.0 | 2.1 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
0.1 | 2.0 | PID VEGF VEGFR PATHWAY | VEGF and VEGFR signaling network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.7 | REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS | Genes involved in Caspase-mediated cleavage of cytoskeletal proteins |
0.1 | 3.4 | REACTOME SYNTHESIS AND INTERCONVERSION OF NUCLEOTIDE DI AND TRIPHOSPHATES | Genes involved in Synthesis and interconversion of nucleotide di- and triphosphates |
0.1 | 2.8 | REACTOME OXYGEN DEPENDENT PROLINE HYDROXYLATION OF HYPOXIA INDUCIBLE FACTOR ALPHA | Genes involved in Oxygen-dependent Proline Hydroxylation of Hypoxia-inducible Factor Alpha |
0.1 | 2.0 | REACTOME VEGF LIGAND RECEPTOR INTERACTIONS | Genes involved in VEGF ligand-receptor interactions |
0.1 | 1.7 | REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE | Genes involved in Reversible Hydration of Carbon Dioxide |
0.0 | 1.7 | REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS | Genes involved in Cell-extracellular matrix interactions |
0.1 | 1.6 | REACTOME PRE NOTCH PROCESSING IN GOLGI | Genes involved in Pre-NOTCH Processing in Golgi |
0.0 | 1.5 | REACTOME DEADENYLATION OF MRNA | Genes involved in Deadenylation of mRNA |
0.0 | 1.5 | REACTOME CGMP EFFECTS | Genes involved in cGMP effects |
0.0 | 1.4 | REACTOME FACILITATIVE NA INDEPENDENT GLUCOSE TRANSPORTERS | Genes involved in Facilitative Na+-independent glucose transporters |