Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
SCRT1 | hg38_v1_chr8_-_144336451_144336503 | 0.46 | 8.5e-03 | Click! |
SCRT2 | hg38_v1_chr20_-_675793_675808 | -0.16 | 3.9e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr4_+_41256921 Show fit | 12.25 |
ENST00000284440.9
ENST00000508768.5 ENST00000512788.1 |
ubiquitin C-terminal hydrolase L1 |
|
chr17_+_39628496 Show fit | 10.10 |
ENST00000394265.5
ENST00000394267.2 |
protein phosphatase 1 regulatory inhibitor subunit 1B |
|
chr12_-_15221394 Show fit | 7.76 |
ENST00000537647.5
ENST00000256953.6 ENST00000546331.5 |
RAS like estrogen regulated growth inhibitor |
|
chr1_+_15756659 Show fit | 6.76 |
ENST00000375771.5
|
filamin binding LIM protein 1 |
|
chr3_+_16174628 Show fit | 6.34 |
ENST00000339732.10
|
polypeptide N-acetylgalactosaminyltransferase 15 |
|
chr3_+_181711915 Show fit | 5.40 |
ENST00000325404.3
|
SRY-box transcription factor 2 |
|
chr5_+_15500172 Show fit | 5.17 |
ENST00000504595.2
|
F-box and leucine rich repeat protein 7 |
|
chr3_+_16174703 Show fit | 5.12 |
ENST00000437509.3
|
polypeptide N-acetylgalactosaminyltransferase 15 |
|
chr6_+_121435595 Show fit | 4.77 |
ENST00000649003.1
ENST00000282561.4 |
gap junction protein alpha 1 |
|
chr4_-_5888400 Show fit | 4.63 |
ENST00000397890.6
|
collapsin response mediator protein 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 17.4 | GO:2000649 | regulation of sodium ion transmembrane transporter activity(GO:2000649) |
0.7 | 12.9 | GO:0033623 | regulation of integrin activation(GO:0033623) |
1.5 | 12.2 | GO:0007412 | axon target recognition(GO:0007412) |
0.7 | 10.1 | GO:0007621 | negative regulation of female receptivity(GO:0007621) |
2.0 | 9.8 | GO:1901350 | cell-cell signaling involved in cell-cell junction organization(GO:1901350) |
0.1 | 8.9 | GO:0016266 | O-glycan processing(GO:0016266) |
1.0 | 8.7 | GO:1990504 | dense core granule exocytosis(GO:1990504) |
0.5 | 7.9 | GO:0010499 | proteasomal ubiquitin-independent protein catabolic process(GO:0010499) |
0.0 | 7.6 | GO:0030308 | negative regulation of cell growth(GO:0030308) |
0.1 | 7.1 | GO:0008089 | anterograde axonal transport(GO:0008089) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 20.7 | GO:1904115 | axon cytoplasm(GO:1904115) |
0.3 | 14.6 | GO:0005921 | gap junction(GO:0005921) |
0.1 | 13.7 | GO:0001725 | stress fiber(GO:0001725) contractile actin filament bundle(GO:0097517) |
0.2 | 11.7 | GO:0031092 | platelet alpha granule membrane(GO:0031092) |
0.1 | 9.9 | GO:0019005 | SCF ubiquitin ligase complex(GO:0019005) |
0.0 | 9.2 | GO:0030133 | transport vesicle(GO:0030133) |
0.1 | 7.9 | GO:0031463 | Cul3-RING ubiquitin ligase complex(GO:0031463) |
0.0 | 6.0 | GO:0030496 | midbody(GO:0030496) |
0.0 | 4.6 | GO:0005604 | basement membrane(GO:0005604) |
0.0 | 4.5 | GO:0005581 | collagen trimer(GO:0005581) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 17.5 | GO:0031005 | filamin binding(GO:0031005) |
0.2 | 17.4 | GO:0017080 | sodium channel regulator activity(GO:0017080) |
2.0 | 12.2 | GO:0031694 | alpha-2A adrenergic receptor binding(GO:0031694) |
0.4 | 11.5 | GO:0004653 | polypeptide N-acetylgalactosaminyltransferase activity(GO:0004653) |
2.5 | 10.1 | GO:0031751 | D4 dopamine receptor binding(GO:0031751) |
0.0 | 8.7 | GO:0005516 | calmodulin binding(GO:0005516) |
0.1 | 7.8 | GO:0030331 | estrogen receptor binding(GO:0030331) |
0.0 | 6.0 | GO:0003777 | microtubule motor activity(GO:0003777) |
0.0 | 5.7 | GO:0061630 | ubiquitin protein ligase activity(GO:0061630) |
0.2 | 5.5 | GO:0042043 | neurexin family protein binding(GO:0042043) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 14.3 | PID ALPHA SYNUCLEIN PATHWAY | Alpha-synuclein signaling |
0.1 | 9.8 | PID NEPHRIN NEPH1 PATHWAY | Nephrin/Neph1 signaling in the kidney podocyte |
0.0 | 6.2 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.1 | 4.9 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
0.1 | 4.3 | PID INTEGRIN5 PATHWAY | Beta5 beta6 beta7 and beta8 integrin cell surface interactions |
0.0 | 3.9 | NABA COLLAGENS | Genes encoding collagen proteins |
0.0 | 3.5 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.0 | 2.9 | PID ARF6 PATHWAY | Arf6 signaling events |
0.0 | 2.7 | PID INTEGRIN3 PATHWAY | Beta3 integrin cell surface interactions |
0.1 | 2.0 | PID CONE PATHWAY | Visual signal transduction: Cones |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 13.7 | REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS | Genes involved in Cell-extracellular matrix interactions |
0.3 | 9.8 | REACTOME APOPTOTIC CLEAVAGE OF CELL ADHESION PROTEINS | Genes involved in Apoptotic cleavage of cell adhesion proteins |
0.1 | 6.9 | REACTOME DARPP 32 EVENTS | Genes involved in DARPP-32 events |
0.2 | 4.9 | REACTOME ALPHA LINOLENIC ACID ALA METABOLISM | Genes involved in alpha-linolenic acid (ALA) metabolism |
0.2 | 4.8 | REACTOME GAP JUNCTION ASSEMBLY | Genes involved in Gap junction assembly |
0.1 | 4.6 | REACTOME CRMPS IN SEMA3A SIGNALING | Genes involved in CRMPs in Sema3A signaling |
0.0 | 3.9 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.1 | 3.8 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.1 | 3.4 | REACTOME PYRUVATE METABOLISM | Genes involved in Pyruvate metabolism |
0.1 | 3.2 | REACTOME METABOLISM OF PORPHYRINS | Genes involved in Metabolism of porphyrins |