Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
SHOX | hg38_v1_chrX_+_630789_630807 | 0.11 | 5.6e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr13_-_46142834 Show fit | 9.42 |
ENST00000674665.1
|
lymphocyte cytosolic protein 1 |
|
chr4_-_25863537 Show fit | 8.29 |
ENST00000502949.5
ENST00000264868.9 ENST00000513691.1 ENST00000514872.1 |
SEL1L family member 3 |
|
chr2_+_90038848 Show fit | 6.14 |
ENST00000390270.2
|
immunoglobulin kappa variable 3D-20 |
|
chr3_-_27722699 Show fit | 5.84 |
ENST00000461503.2
|
eomesodermin |
|
chr4_-_36243939 Show fit | 5.69 |
ENST00000506189.1
|
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 |
|
chr15_+_74788542 Show fit | 5.69 |
ENST00000567571.5
|
C-terminal Src kinase |
|
chr12_-_10130143 Show fit | 5.64 |
ENST00000298523.9
ENST00000396484.6 ENST00000310002.4 ENST00000304084.13 |
C-type lectin domain containing 7A |
|
chr3_-_27722316 Show fit | 5.37 |
ENST00000449599.4
|
eomesodermin |
|
chr15_+_58138368 Show fit | 5.30 |
ENST00000219919.9
ENST00000536493.1 |
aquaporin 9 |
|
chr14_-_106038355 Show fit | 5.06 |
ENST00000390597.3
|
immunoglobulin heavy variable 2-5 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 24.0 | GO:0002377 | immunoglobulin production(GO:0002377) |
0.1 | 14.8 | GO:2000649 | regulation of sodium ion transmembrane transporter activity(GO:2000649) |
0.5 | 12.6 | GO:0009756 | carbohydrate mediated signaling(GO:0009756) |
3.7 | 11.2 | GO:0002302 | CD8-positive, alpha-beta T cell differentiation involved in immune response(GO:0002302) |
2.2 | 11.0 | GO:2000471 | regulation of hematopoietic stem cell migration(GO:2000471) positive regulation of hematopoietic stem cell migration(GO:2000473) |
0.3 | 10.5 | GO:0072643 | interferon-gamma secretion(GO:0072643) |
0.0 | 10.5 | GO:0051056 | regulation of small GTPase mediated signal transduction(GO:0051056) |
0.4 | 9.4 | GO:0071803 | positive regulation of podosome assembly(GO:0071803) |
1.8 | 9.1 | GO:1904823 | pyrimidine nucleobase transport(GO:0015855) purine nucleobase transmembrane transport(GO:1904823) |
0.2 | 8.8 | GO:0050855 | regulation of B cell receptor signaling pathway(GO:0050855) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 15.8 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.1 | 15.5 | GO:0001750 | photoreceptor outer segment(GO:0001750) |
0.3 | 12.5 | GO:0001891 | phagocytic cup(GO:0001891) |
0.5 | 8.9 | GO:0033093 | Weibel-Palade body(GO:0033093) |
1.1 | 8.0 | GO:0036021 | endolysosome lumen(GO:0036021) |
0.0 | 6.7 | GO:0009898 | cytoplasmic side of plasma membrane(GO:0009898) |
0.3 | 6.2 | GO:0036057 | filtration diaphragm(GO:0036056) slit diaphragm(GO:0036057) |
0.0 | 6.0 | GO:0070821 | tertiary granule membrane(GO:0070821) |
0.0 | 5.3 | GO:0005884 | actin filament(GO:0005884) |
0.1 | 5.2 | GO:0001533 | cornified envelope(GO:0001533) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 21.1 | GO:0003823 | antigen binding(GO:0003823) |
0.2 | 15.1 | GO:0017080 | sodium channel regulator activity(GO:0017080) |
0.3 | 12.6 | GO:0008329 | signaling pattern recognition receptor activity(GO:0008329) pattern recognition receptor activity(GO:0038187) |
0.0 | 11.9 | GO:0001077 | transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001077) |
0.3 | 11.0 | GO:0019198 | transmembrane receptor protein tyrosine phosphatase activity(GO:0005001) transmembrane receptor protein phosphatase activity(GO:0019198) |
0.2 | 10.1 | GO:0001968 | fibronectin binding(GO:0001968) |
0.5 | 9.8 | GO:0017017 | MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017) |
1.8 | 9.1 | GO:0005350 | pyrimidine nucleobase transmembrane transporter activity(GO:0005350) |
0.1 | 8.6 | GO:0070491 | repressing transcription factor binding(GO:0070491) |
0.0 | 7.7 | GO:0017124 | SH3 domain binding(GO:0017124) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 19.7 | PID CD8 TCR PATHWAY | TCR signaling in naïve CD8+ T cells |
0.1 | 19.2 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.2 | 12.4 | PID CD8 TCR DOWNSTREAM PATHWAY | Downstream signaling in naïve CD8+ T cells |
0.0 | 8.8 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.2 | 8.7 | ST ERK1 ERK2 MAPK PATHWAY | ERK1/ERK2 MAPK Pathway |
0.1 | 7.9 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.1 | 5.7 | PID ARF6 PATHWAY | Arf6 signaling events |
0.1 | 5.6 | PID IL2 STAT5 PATHWAY | IL2 signaling events mediated by STAT5 |
0.1 | 5.5 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 5.0 | PID RAC1 PATHWAY | RAC1 signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 19.0 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.6 | 16.7 | REACTOME PHOSPHORYLATION OF CD3 AND TCR ZETA CHAINS | Genes involved in Phosphorylation of CD3 and TCR zeta chains |
0.4 | 9.8 | REACTOME ERKS ARE INACTIVATED | Genes involved in ERKs are inactivated |
0.5 | 9.1 | REACTOME PASSIVE TRANSPORT BY AQUAPORINS | Genes involved in Passive Transport by Aquaporins |
0.3 | 8.7 | REACTOME INSULIN SYNTHESIS AND PROCESSING | Genes involved in Insulin Synthesis and Processing |
0.7 | 8.0 | REACTOME ENDOSOMAL VACUOLAR PATHWAY | Genes involved in Endosomal/Vacuolar pathway |
0.1 | 7.5 | REACTOME NOTCH1 INTRACELLULAR DOMAIN REGULATES TRANSCRIPTION | Genes involved in NOTCH1 Intracellular Domain Regulates Transcription |
0.1 | 7.1 | REACTOME NEPHRIN INTERACTIONS | Genes involved in Nephrin interactions |
0.1 | 5.2 | REACTOME IMMUNOREGULATORY INTERACTIONS BETWEEN A LYMPHOID AND A NON LYMPHOID CELL | Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell |
0.2 | 5.1 | REACTOME SYNTHESIS OF PIPS AT THE EARLY ENDOSOME MEMBRANE | Genes involved in Synthesis of PIPs at the early endosome membrane |